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Glycans / Glycoconjugates

GlyCosmos Glycans

The list of validated glycans extracted from GlyTouCan, updated weekly.

GALAXY

GALAXY (Glycoanalysis by the Three Axes of MS and Chromatography) is a database of elution data on glycan structures of glycoproteins analysed by high-performance liquid chromatography (HPLC). The database includes data on 650 neutral, sialylated, glucuronylated, and/or sulfated N-linked oligosaccharides, which are expressed by a diagram in the shape of a tree with a tri-mannosyl core as the trunk and spreading branches .

GlycoNAVI Glycans

GlycoNAVI-Glycans is dataset of glycans. This is the content of GlycoNAVI.

GlycoNAVI Motifs

GlycoNAVI-Motifs is dataset of glycan structure patterns. This is the content of GlycoNAVI.

GlycoBase

GlycoBase is a relational database which contains the HPLC elution positions for over 350 2-AB labelled N-glycan structures together with predicted products of exoglycosidase digestions.

GlycoBase and autoGU: tools for HPLC-based glycan analysis
Campbell MP, et al.
Bioinformatics. 2008 May 1;24(9):1214-6. PMID: 18344517

GlycoStore

GlycoStore is a curated chromatographic, electrophoretic and mass-spectrometry composition database of N-, O-, glycosphingolipid (GSL) glycans and free oligosaccharides associated with a range of glycoproteins, glycolipids and biotherapeutics.GlycoStore provides access to unique glycan structure entries determined by: (i) hydrophilic interaction chromatography (HILIC) ultra-high performance liquid chromatography (U/HPLC) and reversed phase (RP)-U/HPLC with fluorescent detection; (ii) porous graphitized carbon (PGC) chromatography in combination with ESI-MS/MS detection; and (iii) capillary electrophoresis with laser induced fluorescence detection (CE-LIF).

GlycoStore: A Platform for H/UPLC and Capillary Electrophoresis Glycan Data
Campbell MP, et al.
Methods Mol Biol. 2022;2370:25-40. PMID: 34611863

GlycoEpitope

In this database, useful information about carbohydrate antigens, ie, glycoepitopes, and antibodies is organized as a compact encyclopedia.

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen, GlyConnect, GlycoProtDB and The O-GlcNAc Database. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

GlycoProtDB

GlycoProtDB is a glycoprotein database providing information of Asn (N)-glycosylated proteins and their glycosylated site(s), which were constructed by employing a bottom-up strategy using actual glycopeptide sequences identified by LC/MS-based glycoproteomic technologies.