GlyCosmos Portal

Submissions

cadherin 17

Summary

Gene Symbol

Cdh17

Organism

Rattus norvegicus (Norway rat)

External Links

NCBI Gene

117048

KEGG Gene ID

PubChem

117048

Alliance of Genome Resources

RGD:619748

Annotation

Keyword

Calcium
Cell adhesion
Cell membrane
Glycoprotein
Metal-binding
Reference proteome
Repeat
Signal
Transmembrane helix

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A0A8I5ZZV9
A6II73	Liver-intestine cadherin
P55281	Liver-intestine cadherin

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 27 in total

1

2

3

4

5

6

Next ›

Last »
GO Term	Evidence Code	PMID
cell morphogenesis	IBA
germinal center B cell differentiation	ISO
germinal center B cell differentiation	IEA
marginal zone B cell differentiation	ISO
marginal zone B cell differentiation	IEA

GO Hierarchy

biological process

immune system process [inference]

immune effector process [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte mediated immunity [inference]

lymphocyte mediated immunity [inference]

T cell mediated immunity

immune response [inference]

adaptive immune response [inference]

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains [inference]

T cell mediated immunity

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cellular process [inference]

cell activation [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cell adhesion

cell-cell adhesion

signal transduction [inference]

cell surface receptor signaling pathway [inference]

cellular developmental process [inference]

cell differentiation [inference]

leukocyte differentiation [inference]

mononuclear cell differentiation [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cell motility [inference]

cell migration

transmembrane transport

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

cell junction assembly [inference]

cell-cell junction assembly

cell junction organization [inference]

cell junction assembly [inference]

cell-cell junction assembly

cell-cell junction organization [inference]

multicellular organismal process [inference]

cell activation [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

developmental process [inference]

anatomical structure morphogenesis [inference]

cell morphogenesis

anatomical structure development [inference]

animal organ development [inference]

hematopoietic or lymphoid organ development [inference]

spleen development

cellular developmental process [inference]

cell differentiation [inference]

leukocyte differentiation [inference]

mononuclear cell differentiation [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

response to stimulus [inference]

immune response [inference]

adaptive immune response [inference]

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains [inference]

T cell mediated immunity

localization [inference]

establishment of localization [inference]

transport [inference]

peptide transport [inference]

oligopeptide transport

transmembrane transport

nitrogen compound transport [inference]

oligopeptide transport

biological regulation [inference]

regulation of biological process [inference]

positive regulation of biological process [inference]

positive regulation of cellular process [inference]

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of cellular process [inference]

signal transduction [inference]

cell surface receptor signaling pathway [inference]

regulation of cellular component biogenesis [inference]

regulation of protein-containing complex assembly [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of integrin activation [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular process [inference]

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of cellular component organization [inference]

regulation of protein-containing complex assembly [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of integrin activation [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

Displaying entries **1 - 5** of 13 in total

1

2

3

Next ›

Last »
GO Term	Evidence Code	PMID
nucleoplasm
plasma membrane	ISO
plasma membrane	IEA
adherens junction	IBA
cell surface	ISO

GO Hierarchy

cellular component

protein-containing complex [inference]

membrane protein complex [inference]

plasma membrane protein complex [inference]

catenin complex

cellular anatomical structure [inference]

membrane

plasma membrane

plasma membrane region [inference]

basolateral plasma membrane

cell junction

anchoring junction [inference]

cell-cell junction [inference]

adherens junction

Displaying entries **1 - 5** of 8 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
integrin binding	ISO
integrin binding	IEA
proton-dependent oligopeptide secondary active transmembrane transporter activity	ISS
proton-dependent oligopeptide secondary active transmembrane transporter activity	ISO
proton-dependent oligopeptide secondary active transmembrane transporter activity	IEA

GO Hierarchy

molecular function

transporter activity [inference]

transmembrane transporter activity [inference]

active transmembrane transporter activity [inference]

secondary active transmembrane transporter activity [inference]

proton-dependent oligopeptide secondary active transmembrane transporter activity

binding [inference]

protein binding [inference]

signaling receptor binding [inference]

integrin binding

beta-catenin binding

cell adhesion molecule binding [inference]

small molecule binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

protein-containing complex binding [inference]

integrin binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Cadherin

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones

Displaying **all 7** entries
Gene Ontology
adherens junction organization
cadherin binding
calcium ion binding
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
cell-cell adhesion mediated by cadherin
cell-cell junction assembly
homophilic cell adhesion via plasma membrane adhesion molecules

Displaying **all 4** entries
InterPro
Cadherin conserved site
Cadherin-like superfamily
Cadherin-like
Cadherin

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
basolateral plasma membrane	PMID:8207063

Ortholog

Displaying **all 2** entries
Species	Gene ID	Alliance of Genome Resources
Mus musculus	12557	MGI:1095414
Homo sapiens	1015	HGNC:1756

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements