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nidogen 1

Summary

Gene Symbol

Nid1

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

18073

PubChem

18073

Alliance of Genome Resources

MGI:97342

Annotation

Keyword

3D-structure
Basement membrane
Calcium
Cell adhesion
Direct protein sequencing
Disulfide bond
EGF-like domain
Glycoprotein
Reference proteome
Repeat
Signal
Sulfation

Proteins

Displaying 1 entry
UniProt	Protein Name
P10493	Entactin

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
cell-matrix adhesion	IDA	12243745
positive regulation of cell-substrate adhesion	IDA	18757743
extracellular matrix organization	IDA	18757743
glomerular basement membrane development	IMP	14566019
positive regulation of cell adhesion	NAS	3794389

GO Hierarchy

biological process

cellular process [inference]

cell adhesion [inference]

cell-substrate adhesion [inference]

cell-matrix adhesion

cellular component organization or biogenesis [inference]

cellular component organization [inference]

extracellular structure organization [inference]

extracellular matrix organization

glomerular basement membrane development

external encapsulating structure organization [inference]

extracellular matrix organization

glomerular basement membrane development

developmental process [inference]

anatomical structure development [inference]

glomerular basement membrane development

biological regulation [inference]

regulation of biological process [inference]

regulation of signaling [inference]

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

regulation of integrin-mediated signaling pathway [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of signaling [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of biological process [inference]

positive regulation of signaling [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of cellular process [inference]

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

positive regulation of cell adhesion

positive regulation of cell-substrate adhesion

positive regulation of response to stimulus [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of developmental process [inference]

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

regulation of response to stimulus [inference]

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

regulation of integrin-mediated signaling pathway [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of response to stimulus [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

regulation of developmental process [inference]

regulation of cell differentiation [inference]

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

regulation of muscle cell differentiation [inference]

positive regulation of muscle cell differentiation

positive regulation of developmental process [inference]

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

regulation of cellular process [inference]

regulation of cell communication [inference]

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

regulation of integrin-mediated signaling pathway [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

regulation of cell adhesion [inference]

regulation of cell-substrate adhesion [inference]

positive regulation of cell-substrate adhesion

positive regulation of cell adhesion

positive regulation of cell-substrate adhesion

regulation of cell differentiation [inference]

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

regulation of muscle cell differentiation [inference]

positive regulation of muscle cell differentiation

positive regulation of cellular process [inference]

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of integrin-mediated signaling pathway

positive regulation of cell differentiation [inference]

positive regulation of muscle cell differentiation

positive regulation of cell adhesion

positive regulation of cell-substrate adhesion

regulation of cellular component organization [inference]

regulation of extracellular matrix organization [inference]

regulation of basement membrane organization

Displaying entries **1 - 5** of 10 in total

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GO Term	Evidence Code	PMID
extracellular region	TAS
basement membrane	ISO
basement membrane	NAS	1678389
basement membrane	TAS	10958695
basement membrane	IDA	10639489 12051813 12588956 14566019 15895400 16330543 17596926 18757743 7670489

GO Hierarchy

cellular component

protein-containing complex [inference]

protein complex involved in cell adhesion [inference]

protein complex involved in cell-matrix adhesion

cellular anatomical entity [inference]

extracellular region

external encapsulating structure [inference]

extracellular matrix

collagen-containing extracellular matrix

basement membrane

cell periphery

Displaying entries **1 - 5** of 10 in total

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GO Term	Evidence Code	PMID
extracellular matrix structural constituent	RCA	22159717 28071719
calcium ion binding	IEA
protein binding	IPI	11733994 12931195 23948589 36792666 8995276
collagen binding	ISO
collagen binding	IDA	17517882

GO Hierarchy

molecular function

structural molecule activity [inference]

extracellular matrix structural constituent

binding [inference]

protein binding

laminin binding

laminin-1 binding

proteoglycan binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

protein-containing complex binding [inference]

collagen binding

extracellular matrix binding

laminin binding

laminin-1 binding

carbohydrate derivative binding [inference]

proteoglycan binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

low-density lipoprotein receptor-related protein

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
InterPro
Low-density lipoprotein (LDL) receptor class A repeat

Ortholog

Displaying entries **81 - 89** of 89 in total

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Species	Gene ID	Orthologous MAtrix
Gadus morhua	115559469	GADMO16658
Sparus aurata	115596701	SPAAU10196
Strigops habroptila	115614033	STRHB13613
Corvus moneduloides	116440904	CORMO18376
Chelonoidis abingdonii	116821681	CHEAB22683
Rhinolophus ferrumequinum	117018472	RHIFE03692
Scophthalmus maximus	118283918	SCOMX08373
Balaenoptera musculus	118882925	BALMU15698
Panthera leo	122202183	PANLE03315