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H2B clustered histone 5

Summary

Gene Symbol

H2BC5

Organism

Homo sapiens (human)

External Links

NCBI Gene

3017

KEGG Gene ID

PubChem

3017

Alliance of Genome Resources

HGNC:4747

Annotation

Keyword

3D-structure
ADP-ribosylation
Acetylation
Antibiotic
Direct protein sequencing
Glycoprotein
Hydroxylation
Isopeptide bond
Methylation
Nucleosome core
Nucleus
Phosphoprotein
Proteomics identification
Reference proteome
Ubl conjugation

Proteins

Displaying **all 2** entries
UniProt	Protein Name
P62807	Histone H2B.1 A Histone H2B.a Histone H2B.g Histone H2B.h Histone H2B.k Histone H2B.l
P58876	H2B-clustered histone 5 HIRA-interacting protein 2 Histone H2B.1 B Histone H2B.b

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
innate immune response in mucosa	IDA
innate immune response in mucosa	IBA
chromatin organization	IBA
nucleosome assembly	NAS
antibacterial humoral response	IDA

GO Hierarchy

biological process

immune system process [inference]

immune response [inference]

organ or tissue specific immune response [inference]

mucosal immune response [inference]

innate immune response in mucosa

humoral immune response [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

cellular process [inference]

cellular component organization or biogenesis [inference]

cellular component organization [inference]

chromatin organization

chromatin remodeling [inference]

nucleosome organization [inference]

nucleosome assembly

cellular component assembly [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

nucleosome assembly

protein-containing complex organization [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

nucleosome assembly

protein-DNA complex organization [inference]

nucleosome organization [inference]

nucleosome assembly

protein-DNA complex assembly [inference]

nucleosome assembly

biological process involved in interspecies interaction between organisms [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium [inference]

defense response to other organism [inference]

defense response to symbiont [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

response to stimulus [inference]

response to stress [inference]

defense response [inference]

defense response to bacterium [inference]

defense response to other organism [inference]

defense response to symbiont [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

immune response [inference]

organ or tissue specific immune response [inference]

mucosal immune response [inference]

innate immune response in mucosa

humoral immune response [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

response to external stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium [inference]

defense response to other organism [inference]

defense response to symbiont [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

response to biotic stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium [inference]

defense response to other organism [inference]

defense response to symbiont [inference]

antimicrobial humoral response [inference]

innate immune response [inference]

innate immune response in mucosa

Displaying entries **6 - 10** of 15 in total

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GO Term	Evidence Code	PMID
nucleus	IDA
nucleus	IBA
nucleus	IEA
nucleus	HDA
nucleoplasm	TAS

GO Hierarchy

cellular component

protein-containing complex [inference]

protein-DNA complex [inference]

nucleosome

cellular anatomical structure [inference]

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

extracellular vesicle [inference]

extracellular exosome

intracellular membrane-bounded organelle [inference]

nucleus

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

membraneless organelle [inference]

intracellular membraneless organelle [inference]

chromosome

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular membraneless organelle [inference]

chromosome

extracellular organelle [inference]

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
DNA binding	NAS
DNA binding	IBA
DNA binding	IEA
protein binding	IPI
structural constituent of chromatin	IBA

GO Hierarchy

molecular function

structural molecule activity [inference]

structural constituent of chromatin

binding [inference]

nucleic acid binding [inference]

DNA binding

protein binding

identical protein binding

protein dimerization activity [inference]

protein heterodimerization activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Histone H2B

Functional Category

J: Translation, ribosomal structure and biogenesis

Displaying **all 6** entries
Gene Ontology
antimicrobial humoral immune response mediated by antimicrobial peptide
defense response to Gram-positive bacterium
innate immune response in mucosa
nucleosome assembly
protein heterodimerization activity
structural constituent of chromatin

Displaying **all 3** entries
InterPro
Histone H2A/H2B/H3
Histone H2B
Histone-fold

Ortholog

Displaying entries **1 - 10** of 44 in total

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Species	Gene ID	Alliance of Genome Resources
Mus musculus	319179	MGI:2448380
Mus musculus	319181	MGI:2448386
Mus musculus	319186	MGI:2448404
Mus musculus	68024	MGI:1915274
Mus musculus	78303	MGI:1925553
Caenorhabditis elegans	175026	WB:WBGene00001889
Caenorhabditis elegans	175029	WB:WBGene00001885
Caenorhabditis elegans	175033	WB:WBGene00001918
Caenorhabditis elegans	178049	WB:WBGene00001922
Caenorhabditis elegans	179262	WB:WBGene00001926