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Repository for lectin-assisted multimodality data

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Guidelines

MIRAGE

glycosyltransferase-like domain containing 1

Summary

Gene Symbol

gtdc1

Organism

Danio rerio (zebrafish)

External Links

NCBI Gene

550132

PubChem

550132

Alliance of Genome Resources

ZFIN:ZDB-GENE-050417-8

Annotation

Keyword

Cytoplasm
Glycosyltransferase
Nucleus
Reference proteome

Proteins

Displaying **all 2** entries
UniProt	Protein Name
Q568B7	Glycosyltransferase-like domain-containing protein 1
A0A8M6Z8E3	Glycosyltransferase-like domain-containing protein 1

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 3** entries
GO Term	Evidence Code	PMID
tRNA modification	ISS
regulation of translation	ISS
central nervous system development	IMP	28365779

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule modification [inference]

RNA modification [inference]

tRNA modification

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

RNA modification [inference]

tRNA modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification

developmental process [inference]

anatomical structure development [inference]

system development [inference]

central nervous system development

biological regulation [inference]

regulation of biological process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

post-transcriptional regulation of gene expression [inference]

regulation of translation

regulation of cellular metabolic process [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

post-transcriptional regulation of gene expression [inference]

regulation of translation

regulation of nitrogen compound metabolic process [inference]

regulation of amide metabolic process [inference]

regulation of translation

regulation of protein metabolic process [inference]

regulation of translation

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

post-transcriptional regulation of gene expression [inference]

regulation of translation

regulation of protein metabolic process [inference]

regulation of translation

regulation of primary metabolic process [inference]

regulation of protein metabolic process [inference]

regulation of translation

regulation of cellular process [inference]

regulation of cellular metabolic process [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

post-transcriptional regulation of gene expression [inference]

regulation of translation

Displaying **all 5** entries
GO Term	Evidence Code	PMID
cellular_component	ND
nucleus	ISS
nucleus	IEA
cytoplasm	ISS
cytoplasm	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying **all 4** entries
GO Term	Evidence Code	PMID
tRNA-queuosine beta-mannosyltransferase activity	ISS
tRNA-queuosine beta-mannosyltransferase activity	IEA
transferase activity	IEA
glycosyltransferase activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity

glycosyltransferase activity

hexosyltransferase activity [inference]

mannosyltransferase activity [inference]

tRNA-queuosine beta-mannosyltransferase activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on RNA [inference]

catalytic activity, acting on a tRNA [inference]

tRNA-queuosine beta-mannosyltransferase activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Glycosyltransferase-like domain-containing protein 1,Glycosyltransferase-like domain-containing protein 1-like

Functional Category

G: Carbohydrate transport and metabolism
M: Cell wall/membrane/envelope biogenesis
T: Signal transduction mechanisms

Displaying **all 2** entries
InterPro
Glycosyl transferase, family 1
Glycosyltransferase family 1, N-terminal

Rhea

GDP-α-D-mannose

H⁺ + GDP

Enzyme

2.4.1.110

PMID

Ortholog

Displaying entries **71 - 79** of 79 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Podarcis muralis	114604828		PODMU08808
Echeneis naucrates	115062390		ECHNA13842
Salmo trutta	115160842		SALTR14490
Sparus aurata	115588381		SPAAU27667
Strigops habroptila	115607963		STRHB04010
Corvus moneduloides	116446344		CORMO24844
Rhinolophus ferrumequinum	117026339		RHIFE13756
Balaenoptera musculus	118898244		BALMU00152
Panthera leo	122226050		PANLE09307

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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GlyCosmos Portal v4.3.0

Last updated: August 4, 2025