GlyCosmos Portal

Annotation

Keyword

Alternative splicing
Coiled coil
Cytoplasm
DNA-binding
Direct protein sequencing
Initiation factor
Nucleus
Oogenesis
Phosphoprotein
Proteomics identification
Reference proteome
Spermatogenesis
Transcription regulation

Proteins

Displaying **all 3** entries
UniProt	Protein Name
Q92750	Transcription initiation factor TFIID 105 kDa subunit
B4DYT3
J3KTH2

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 11 in total

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GO Term	Evidence Code	PMID
transcription, DNA-templated	IEA
DNA-templated transcription	IEA
DNA-templated transcription initiation	IEA
transcription initiation at RNA polymerase II promoter	IBA
spermatogenesis

GO Hierarchy

biological process

cellular process [inference]

metabolic process [inference]

biosynthetic process [inference]

macromolecule biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleobase-containing compound biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II [inference]

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular process involved in reproduction in multicellular organism [inference]

germ cell development [inference]

oogenesis

cellular developmental process [inference]

cell development [inference]

germ cell development [inference]

oogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

protein-containing complex organization [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

protein-DNA complex organization [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

reproductive process [inference]

developmental process involved in reproduction [inference]

germ cell development [inference]

oogenesis

spermatogenesis

multicellular organismal reproductive process [inference]

gamete generation [inference]

female gamete generation [inference]

oogenesis

male gamete generation [inference]

spermatogenesis

cellular process involved in reproduction in multicellular organism [inference]

germ cell development [inference]

oogenesis

developmental process [inference]

developmental process involved in reproduction [inference]

germ cell development [inference]

oogenesis

spermatogenesis

anatomical structure development [inference]

cell development [inference]

germ cell development [inference]

oogenesis

cellular developmental process [inference]

cell development [inference]

germ cell development [inference]

oogenesis

biological regulation [inference]

regulation of biological process [inference]

positive regulation of biological process [inference]

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of cellular process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA metabolic process [inference]

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of primary metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of DNA-templated transcription [inference]

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

Displaying entries **1 - 5** of 10 in total

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GO Term	Evidence Code	PMID
fibrillar center	IDA
nucleus	EXP
nucleus	IEA
nucleoplasm	TAS
nucleoplasm	IDA

GO Hierarchy

cellular component

protein-containing complex [inference]

transcription regulator complex [inference]

RNA polymerase II transcription regulator complex [inference]

transcription factor TFIID complex

nuclear protein-containing complex [inference]

RNA polymerase II transcription regulator complex [inference]

transcription factor TFIID complex

cellular anatomical structure [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
DNA binding	IDA
DNA binding	IBA
translation initiation factor activity
RNA polymerase II general transcription initiation factor activity	IC
RNA polymerase II general transcription initiation factor activity	IBA

GO Hierarchy

molecular function

binding [inference]

nucleic acid binding [inference]

DNA binding

protein binding [inference]

transcription factor binding [inference]

DNA-binding transcription factor binding [inference]

RNA polymerase II-specific DNA-binding transcription factor binding

NF-kappaB binding

protein dimerization activity [inference]

protein heterodimerization activity

general transcription initiation factor activity [inference]

RNA polymerase II general transcription initiation factor activity

translation factor activity [inference]

translation initiation factor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

transcription initiation factor TFIID subunit

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
protein heterodimerization activity
transcription initiation at RNA polymerase II promoter

Displaying **all 5** entries
InterPro
Histone-fold
TAFH/NHR1 domain superfamily
TAFH/NHR1
Transcription initiation factor TFIID component TAF4, C-terminal
Transcription initiation factor TFIID component TAF4

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0070182	spermatogenic failure 13	Alliance of Genome Resources

Ortholog

Displaying **all 2** entries
Species	Gene ID	Alliance of Genome Resources
Mus musculus	72504	MGI:2152345
Drosophila melanogaster	39765	FB:FBgn0010280

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements