GlyCosmos Portal

Submissions

pumilio RNA-binding family member 1

Summary

Gene Symbol

Pum1

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

80912

KEGG Gene ID

PubChem

80912

Alliance of Genome Resources

MGI:1931749

Annotation

Keyword

Acetylation
Alternative splicing
Cytoplasm
Methylation
Phosphoprotein
Proteomics identification
RNA-binding
Reference proteome
Repeat
Spermatogenesis
Translation regulation

Proteins

Displaying **all 4** entries
UniProt	Protein Name
Q3TQ21
Q80U78
Q3TTW5
E9Q6M7

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 31 in total

1

2

3

4

5

…

Next ›

Last »
GO Term	Evidence Code	PMID
regulation of translation
spermatogenesis	IMP
adult locomotory behavior	IMP
post-transcriptional regulation of gene expression	ISO
posttranscriptional regulation of gene expression	ISO

GO Hierarchy

biological process

cellular process [inference]

metabolic process [inference]

primary metabolic process [inference]

RNA processing [inference]

regulatory ncRNA processing [inference]

miRNA processing

cellular developmental process [inference]

cell differentiation [inference]

stem cell differentiation

reproductive process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

multicellular organismal reproductive process [inference]

gamete generation [inference]

male gamete generation [inference]

spermatogenesis

multicellular organismal process [inference]

behavior [inference]

locomotory behavior [inference]

adult locomotory behavior

adult behavior [inference]

adult locomotory behavior

developmental process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

cellular developmental process [inference]

cell differentiation [inference]

stem cell differentiation

biological regulation [inference]

regulation of biological process [inference]

regulation of immune system process [inference]

positive regulation of immune system process [inference]

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of immune response [inference]

regulation of innate immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of signaling [inference]

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of intracellular signal transduction [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of signaling [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of biological process [inference]

positive regulation of immune system process [inference]

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of signaling [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of catabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of macromolecule metabolic process [inference]

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of response to stimulus [inference]

positive regulation of response to biotic stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of defense response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of response to external stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of post-transcriptional gene silencing [inference]

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

negative regulation of biological process [inference]

negative regulation of cellular process [inference]

negative regulation of metabolic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of response to stimulus [inference]

regulation of response to biotic stimulus [inference]

positive regulation of response to biotic stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of innate immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of intracellular signal transduction [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

regulation of response to external stimulus [inference]

positive regulation of response to external stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of innate immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of response to stimulus [inference]

positive regulation of response to biotic stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of defense response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of response to external stimulus [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of immune response [inference]

regulation of innate immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of response to stress [inference]

regulation of defense response [inference]

positive regulation of defense response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of innate immune response [inference]

positive regulation of innate immune response [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of cellular process [inference]

regulation of cell communication [inference]

regulation of signal transduction [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

regulation of pattern recognition receptor signaling pathway [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

regulation of intracellular signal transduction [inference]

regulation of cytoplasmic pattern recognition receptor signaling pathway [inference]

regulation of RIG-I signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

posttranscriptional regulation of gene expression

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

negative regulation of gene expression [inference]

regulation of post-transcriptional gene silencing [inference]

positive regulation of post-transcriptional gene silencing [inference]

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of post-transcriptional gene silencing by regulatory ncRNA [inference]

regulation of miRNA-mediated gene silencing [inference]

positive regulation of miRNA-mediated gene silencing

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of gene silencing by regulatory ncRNA [inference]

regulation of post-transcriptional gene silencing by regulatory ncRNA [inference]

regulation of miRNA-mediated gene silencing [inference]

positive regulation of miRNA-mediated gene silencing

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of mRNA catabolic process [inference]

regulation of mRNA stability

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of metabolic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

positive regulation of metabolic process [inference]

positive regulation of catabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of macromolecule metabolic process [inference]

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of catabolic process [inference]

positive regulation of catabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

regulation of mRNA catabolic process [inference]

regulation of mRNA stability

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

posttranscriptional regulation of gene expression

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

negative regulation of gene expression [inference]

regulation of post-transcriptional gene silencing [inference]

positive regulation of post-transcriptional gene silencing [inference]

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of post-transcriptional gene silencing by regulatory ncRNA [inference]

regulation of miRNA-mediated gene silencing [inference]

positive regulation of miRNA-mediated gene silencing

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of gene silencing by regulatory ncRNA [inference]

regulation of post-transcriptional gene silencing by regulatory ncRNA [inference]

regulation of miRNA-mediated gene silencing [inference]

positive regulation of miRNA-mediated gene silencing

positive regulation of post-transcriptional gene silencing by RNA [inference]

positive regulation of miRNA-mediated gene silencing

regulation of mRNA catabolic process [inference]

regulation of mRNA stability

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

positive regulation of macromolecule metabolic process [inference]

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of protein metabolic process [inference]

regulation of translation

regulation of RNA metabolic process [inference]

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of mRNA metabolic process [inference]

regulation of mRNA catabolic process [inference]

regulation of mRNA stability

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of primary metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of mRNA metabolic process [inference]

regulation of mRNA catabolic process [inference]

regulation of mRNA stability

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

regulation of protein metabolic process [inference]

regulation of translation

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of catabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of macromolecule metabolic process [inference]

positive regulation of RNA metabolic process [inference]

RNA destabilization [inference]

mRNA destabilization

positive regulation of mRNA metabolic process [inference]

positive regulation of mRNA catabolic process [inference]

mRNA destabilization

positive regulation of cell communication [inference]

positive regulation of signal transduction [inference]

positive regulation of pattern recognition receptor signaling pathway [inference]

positive regulation of RIG-I signaling pathway

positive regulation of intracellular signal transduction [inference]

positive regulation of RIG-I signaling pathway

negative regulation of cellular process [inference]

negative regulation of metabolic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cell cycle

regulation of cell cycle process [inference]

regulation of chromosome segregation

regulation of biological quality [inference]

regulation of RNA stability [inference]

regulation of mRNA stability

mRNA destabilization

RNA destabilization [inference]

mRNA destabilization

Displaying entries **1 - 5** of 15 in total

1

2

3

Next ›

Last »
GO Term	Evidence Code	PMID
P-body	ISS
P-body	ISO
P-body	IEA
nucleoplasm	ISO
nucleoplasm	IEA

GO Hierarchy

cellular component

cellular anatomical structure [inference]

cell projection [inference]

plasma membrane bounded cell projection [inference]

neuron projection [inference]

axon

organelle [inference]

membraneless organelle [inference]

intracellular membraneless organelle [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

intracellular organelle [inference]

intracellular membraneless organelle [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

supramolecular complex [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

Displaying entries **1 - 5** of 8 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
RNA binding	ISO
RNA binding	IEA
mRNA 3'-UTR binding	ISO
mRNA 3'-UTR binding	IDA
mRNA 3'-UTR binding	IBA

GO Hierarchy

molecular function

binding [inference]

nucleic acid binding [inference]

RNA binding

mRNA binding [inference]

mRNA 3'-UTR binding

regulatory RNA binding [inference]

miRNA binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

pumilio

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
mRNA 3'-UTR binding

Displaying **all 5** entries
InterPro
Armadillo-like helical
Armadillo-type fold
Pumilio RNA-binding repeat
Pumilio homology domain
Pumilio, RNA binding domain

Ortholog

Displaying **all 2** entries
Species	Gene ID	Alliance of Genome Resources
Homo sapiens	9698	HGNC:14957
Saccharomyces cerevisiae S288C	850647	SGD:S000003936

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements