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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G25520XG
Summary
- GlyTouCan ID
-
G25520XG
- IUPAC Condensed
- Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-4)][Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- N-Glycan complex N-acetyllactosamine Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1989.73
3D Structures
GlycoShape
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Coturnix japonica (Japanese quail) | |
| unidentified influenza virus |
Taxonomic Hierarchy
root
cellular organisms [inference]
GlycoGene Database (GGDB)
G95617FJ
KEGG BRITE Database
- KEGG ID
GALAXY
G10733HY
G30159WR
G78059CC
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P01880 | Immunoglobulin heavy constant delta | ||
| P02771 | Alpha-fetoprotein | ||
| P02786 | Transferrin receptor protein 1 | ||
| P02787 | Serotransferrin | ||
| P03459 | Hemagglutinin | ||
| P04273 | Major prion protein | ||
| P04275 | von Willebrand factor | ||
| P05556 | Integrin beta-1 | ||
| P06731 | Cell adhesion molecule CEACAM5 | ||
| P08289 | Alkaline phosphatase, tissue-nonspecific isozyme |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:b-dgal-HEX-1:5 16b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(4+1)10d 10:10d(2+1)11n 11:5o(6+1)12d 12:12o(2+1)13d 13:13d(2+1)14n 14:13o(4+1)15d 15:1o(6+1)16d
- WURCS
- WURCS=2.0/5,11,10/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-1-3-1-4-5/a4-b1_a6-k1_b4-c1_c3-d1_c4-g1_c6-h1_d2-e1_e4-f1_h2-i1_i4-j1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 7686446 | Sugar chains of human cord serum alpha-fetoprotein: characteristics of N-linked sugar chains of glycoproteins produced in human liver and hepatocellular carcinomas | Yamashita K | 1993 Jul 01 |
|
| 8274017 | Structural Study of the Sugar Chains of Porcine Factor VIII - Tissue- and Species-Specific Glycosylation of Factor VIII | Hironaka T | 1993 Dec |
|
| 8299354 | Comparative studies of asparagine-linked sugar chains of immunoglobulin G from eleven mammalian species | Hamako J | 1993 Dec |
|
| 1456441 | N-glycosylation site mapping of human serotransferrin by serial lectin affinity chromatography, fast atom bombardment-mass spectrometry, and 1H nuclear magnetic resonance spectroscopy | Fu D | 1992 Oct |
|
| 1577715 | Structures of the asparagine-linked oligosaccharide chains of human von Willebrand factor. Occurrence of blood group A, B, and H(O) structures | Matsui T | 1992 May 05 |
|
| 1555586 | Structure of the N-linked oligosaccharides of the human transferrin receptor | ORBERGER G | 1992 Apr 01 |
|
| 1898343 | Carbohydrate structure of human pancreatic elastase 1 | Wendorf P | 1991 Sep 01 |
|
| 1841682 | Structures of asparagine-linked oligosaccharides from hen egg-yolk antibody (IgY). Occurrence of unusual glucosylated oligo-mannose type oligosaccharides in a mature glycoprotein | Ohta M | 1991 Oct |
|
| 1694115 | Unique structure of glycopeptide from alpha-fetoprotein produced in human hepatoma cell line, as determined by 1H-nuclear magnetic resonance spectroscopy | Terrana B | 1990 Jun |
|
| 2363690 | A comparative study of the N-linked oligosaccharide structures of human IgG subclass proteins | Jefferis R | 1990 Jun 15 |
|
