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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
- 9 3780 3968 4708 25653 28493 29021 29527 29549 31775 32028 32903 33539 36048 36270 37035 37525 37675 37677 37678 39452 39454 39456 39609 39611 39613 39614 40149 40150 40151 40355 40591 40600 42059 42207 42220 43184 43893 43925 43926 43931 43932 43941 44395 44396 44397 44549 46453 47268 47468 47537 47603 47796 48630 48812 48813 49006 49732 50589 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Streptococcus pneumoniae | |
| Mus musculus (house mouse) | |
| Saccharomyces cerevisiae (brewer's yeast) | |
| Sus scrofa (pig) | |
| Rattus norvegicus (Norway rat) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B3GALT1 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALNT4 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B4GALNT3 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B3GALNT2 | UDP-GalNAc |
G49108TO
|
R |
G36387CV
|
R | |
| B4GALT1 | UDP-Glc |
G49108TO
|
R |
G38884XS
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-thio-p-Nitrophenyl |
G00055MO
|
[beta]-1-thio-p-Nitrophenyl | |
| B4GALT3 | UDP-Gal |
G49108TO
|
4-Me-lumbelyl-[beta] |
G00055MO
|
4-Me-lumbelyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl | |
| B4GALT1 | UDP-Gal |
G49108TO
|
G00055MO
|
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9NRK6 | ATP-binding cassette sub-family B member 10, mitochondrial | ||
| Q9NRL3 | Striatin-4 | ||
| Q9NRM2 | Zinc finger protein 277 | ||
| Q9NRM7 | Serine/threonine-protein kinase LATS2 | ||
| Q9NRR4 | Ribonuclease 3 | ||
| Q9NRR5 | Ubiquilin-4 | ||
| Q9NRX1 | RNA-binding protein PNO1 | ||
| Q9NS00 | Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 | ||
| Q9NS40 | Voltage-gated inwardly rectifying potassium channel KCNH7 | ||
| Q9NS62 | Thrombospondin type-1 domain-containing protein 1 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Sus scrofa |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Mus musculus |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 38225483 | Salivary metabolomics in oral potentially malignant disorders and oral cancer patients—a systematic review with meta-analysis | Nazar NSBM | 2024 Jan 16 |
|
| 38214835 | Design of synthetic peptide-based fluorescence probes for turn-on detection of hyaluronan | Fan X | 2024 Jan 12 |
|
| 39113276 | Impact of chitin-derived β-N-acetyl-<scp>d</scp>-glucosaminyl-(1,4)-<scp>d</scp>-glucosamine on chitinase upregulation in Shewanella baltica | Hirano T | 2024 Jan 09 |
|
| 38191912 | O-GlcNAcylation mediates H2O2-induced apoptosis through regulation of STAT3 and FOXO1 | Zhang CC | 2024 Jan 08 |
|
| 38179648 | The Development of Aspergillus flavus and Biosynthesis of Aflatoxin B1 are Regulated by the Golgi-Localized Mn2+ Transporter Pmr1 | Qu S | 2024 Jan 05 |
|
| 38056619 | maresin2 fine-tunes ULK1 O-GlcNAcylation to improve post myocardial infarction remodeling | Zhang J | 2024 Jan 05 |
|
| 38177117 | Cullin5 drives experimental asthma exacerbations by modulating alveolar macrophage antiviral immunity | Zhang H | 2024 Jan 04 |
|
| 38172512 | Diverse array of neutralizing antibodies elicited upon Spike Ferritin Nanoparticle vaccination in rhesus macaques | Sankhala RS | 2024 Jan 03 |
|
| 38016609 | Revealing the conformational dynamics of UDP-GlcNAc recognition by O-GlcNAc transferase via Markov state model | Tian J | 2024 Jan |
|
| 38142486 | Characterization of the bispecific VHH antibody gefurulimab (ALXN1720) targeting complement component 5, and designed for low volume subcutaneous administration | Jindal S | 2024 Jan |
|
