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Glycan Structure Repository
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G50353PP
Summary
- GlyTouCan ID
-
G50353PP
- IUPAC Condensed
- Neu5Ac(a2-6)Gal(b1-4)[Fuc(a1-?)]GlcNAc(b1-2)Man(a1-?)[Neu5Ac(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- Lewis x Lex N-Glycan complex N-acetyllactosamine SSEA-1 Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 2514.9
3D Structures
- GlycoShape
- G50353PP
Organisms
| Organisms | Evidence |
|---|---|
| Homo sapiens (human) |
Taxonomic Hierarchy
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P02771 | Alpha-fetoprotein |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8b:a-lgal-HEX-1:5|6:d 9s:n-acetyl 10b:b-dgal-HEX-1:5 11b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:b-dgal-HEX-1:5 17b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 18s:n-acetyl 19b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(-1+1)6d 6:6o(2+1)7d 7:7o(-1+1)8d 8:7d(2+1)9n 9:7o(4+1)10d 10:10o(6+2)11d 11:11d(5+1)12n 12:5o(-1+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:14o(4+1)16d 16:16o(6+2)17d 17:17d(5+1)18n 18:1o(6+1)19d
- WURCS
- WURCS=2.0/6,13,12/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-1-2-3-1-4-5-6-3-1-5-6-4/a4-b1_a6-m1_b4-c1_d2-e1_e4-g1_g6-h2_i2-j1_j4-k1_k6-l2_c?-d1_c?-i1_e?-f1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 7679920 | Carbohydrate structures of human alpha-fetoprotein of patients with hepatocellular carcinoma: presence of fucosylated and non-fucosylated triantennary glycans | Aoyagi Y | 1993 Mar |
|
| 7686446 | Sugar chains of human cord serum alpha-fetoprotein: characteristics of N-linked sugar chains of glycoproteins produced in human liver and hepatocellular carcinomas | Yamashita K | 1993 Jul 01 |
|
| 1694115 | Unique structure of glycopeptide from alpha-fetoprotein produced in human hepatoma cell line, as determined by 1H-nuclear magnetic resonance spectroscopy | Terrana B | 1990 Jun |
|
| 6192908 | Sugar chain of alpha-fetoprotein produced in human yolk sac tumor | Yamashita K | 1983 Oct |
|
