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Collagen alpha-5(VI) chain
Summary
- UniProt ID
- A6H584
- Gene Symbol
- Col29a1 Col6a5 Gm7455
- Gene ID
- 665033
- Organism
- Mus musculus (house mouse)
External Links
- GlycoProtDB
- GPDB0001796
- GlyGen
- A6H584
- The O-GlcNAc Database
- A6H584
- Re-Glyco
- A6H584
Annotation
- Keyword
- Cell adhesion Collagen Extracellular matrix Glycoprotein Hydroxylation Reference proteome Repeat Signal
Gene Ontology (GO)
| GO Term | Evidence Code | Reference |
|---|---|---|
| cell adhesion |
|
|
| extracellular matrix organization |
GO Hierarchy
| GO Term | Evidence Code | Reference |
|---|---|---|
| extracellular region | ||
| collagen type VI trimer | ||
| collagen type VI trimer | ||
| extracellular matrix | ||
| extracellular matrix |
GO Hierarchy
Sequence
MKLRLIAFVLILWTETLADQSPGPGPEYADVVFLVDSSNYLGIKSFPFVRTFLNRMISSLPIEANKYRVALAQYSDALHNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALQEAHRTYFSAPTNGRDKKQFPPILVVLASAESEDDVEEAAKALREDGVKIISVGVQKASEENLKAMATSQFHFNLRTARDLGMFAPNMTRIIKDVTQYREGTTVDLITAVAPTTPAAPATPAAPTIPAALTTAANHVDKTVPFPTSCQKDSLADLIFLVDESVGTTQNLRDLQNFLENVTSSVDVKDNCMRLGLMSFSDRAQTISSLRSSANQSEFQQQIQKLSLQTGASNVGAAIEQMRKEGFSESSGSRKAQGVPQIAVLVTHRASDDMVREAALDLRLEGVTMFAMGIEGANNTQLEDIVSYPSRQSISTHSSYSHLESYSGNFLKKIRNEIWTQVSTRAEQMELDKTGCVDTKEADIYFLIDGSSSIRKKEFEQIQIFMSSVIDMFPIGPNKVRVGVVQYSHKNEVEFPVSRYTDGIDLKKAVFNIKQLKGLTFTGKALDFILPLIKKGKTERTDRAPCYLIVLTDGKSNDSVLEPANRLRAEQITIHAIGIGEANKTQLRQIAGKDERVNFGQNFDSLKSIKNEIVHRICSEKGCEDMKADIMFLVDSSGSIGPTNFETMKTFMKNLVGKIQIGADRSQVGVVQFSDYNREEFQLNKYSTHEEIYAAIDRMSPINRNTLTGGALTFVNEYFDLSKGGRPQVRKFLILLTDGKAQDEVGGPATALRSKSVTIFSVGVYGANRAQLEEISGDGSLVFHVENFDHLKAIESKLIFRVCALHDCKRIELLDIVFVLDHSGSIGPREQESMMNLTIHLVKKADVGRDRVQIGALTYSNHPEILFYLNTYSSGSAIAEHLRRPRDTGGETYTAKALQHSNVLFTEEHGSRLTQNVRQLMIVITDGVSHDRDKLDEAARELRDKGITIFAVGVGNANQDELETMAGKKENTVHVDNFDKLRDIYLPLQETLCNNSQETCNLPEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIESQRMKIGMAQYGSRYQEIIELESSLNKTQWKSQVHSVAQSKGLPRLDFALKHVSDMFDPSVGGRRNAGVPQTLVVITSSSPRYDVTDAVKVLKDLGICVLALGIGDVYKEQLLPITGNSEKIITFRDFNKLKNVDVKKRMVREICQSCGKANCFVDVVVGFDISTHRQGQPLFQGHPRLESYLPGILEDITSIRGVSCGAGAEAQVSLAFKVNSDQEFPAKFQIYQKAAFDSLLHVTVRGPTHLDAPFLQSLWDMFEERSASRGQVLLIFSDGLQGESITLLERQSDRLREAGLDALLVVSLNTFGHDEFSSFEFGKGFDYRTQLTIGMLDLGKTLSQYLGNIAERACCCTFCKCPGIPGPHGTRGLQASKGSSGPKGSRGHRGEDGDPGRRGEIGLQGDRGVVGCPGTRGQKGVKGFSGAQGEHGEDGLDGLDGEEGFYGFRGGKGQKGDPGNQGYPGIRGAAGEDGEKGFPGDPGDPGKDSNIKGQKGEKGERGRQGITGQKGTHGRPSSKGSRGMEGQRGPQGPSGQAGNPGPQGTQGPEGLQGSQGSSGNRGGKGDKGSQGYQGPQGSPGPAGPRGDIGRPGFGGRKGEPGVPGGPGPVGPPGQRGKQGDYGIPGYGQTGRKGVKGPTGFPGDPGQKGDAGNPGIPGGPGPKGFKGLTLSQGLKGRSGLQGSQGPPGRRGPKGTAGQPIYSPCELIQFLRDHSLIFTDKCPVYPTELVFALDQSSGITERRFNETRDTITSIVSDLNIRENNCPVGARVAVVSYDSDTSYLIRGSDYHNKKHLLQLLSQIKYQVPRKARDIGNAMRFVARNVFKRMSAGTNTRRVAVFFSNGQAASRASILTATMELSALDISLAVFAYNERVFLDEAFGFDDTGTFQVIPVPPVGDYEPLEKLRRCTLCYDKCFPNTCAEEPFFPENSYMDVAFLLDNSKNIASDDFQAVKALVSSVIDSFHITSNPSASESGDRVALLSYSPSESSRRKGRVKTEFAFTTYDNQSIMKNYIYTSLQQLNGDATIGLALQWAMEGLFLGTPNPRKHKVIIVISAGENHEEKEFVKTVALRAKCQGYVVFVISLGSTQRDEMEELASYPLDHHLIQLGRMYKPDLNYIVKFLKPFIYSVRRGFNQYPPPTLKDDCRLVELERGDTLPHGLRLTAKLREVPESTISLADQELNAGKDSSFVLEDHRGDHLVYVPSQMLEPHKLVSHYGNDRESVAMASLTSEHESHGREELGLAHEPGDASLQEYYMDVAFLIDASQRVGGRNEFKEVRTLITSVLDYFHIAPAPLTSVLGDRVAVLTYSPPGYLPNTEECPVYLEFDLVTYNTVHQMKHHLQESLQQLNGDVFIGHALQWTVDNVFVGTPNLRKNKVIFIVTAGETNPLDKEVLRNASLRAKCQGYSIFVFSFGPIHNDMELEELASHPLDHHLVRLGRVHRPDLDYVIKFIKPFVHSIRRAINKYPGRDLQAKCDNLTFPGPENAGTEDSALLIPEVYRIEAGENELSGDSGSQEQHFFLLGNSHGNHSESTADLMRQLYLLLSSGELMVNDKEEPCSAETPAPVNSKQDGEDAR
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 201 |
|
|
||
| 227 |
|
|
||
| 234 |
|
|
||
| 292 |
|
|
||
| 326 |
|
|||
| 399 |
|
|||
| 588 |
|
|||
| 614 |
|
|||
| 1096 |
|
|
||
| 2541 |
|
|
G62765YT
G49108TO
G80920RR
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| Assembly of collagen fibrils and other multimeric structures | Mus musculus |
| Collagen biosynthesis and modifying enzymes | Mus musculus |
| Collagen chain trimerization | Mus musculus |
| Collagen degradation | Mus musculus |
| ECM proteoglycans | Mus musculus |
| Integrin cell surface interactions | Mus musculus |
| NCAM1 interactions | Mus musculus |
| Signaling by PDGF | Mus musculus |
