GlyCosmos Portal

Annotation

Keyword: Nucleus Phosphoprotein Proteomics identification Reference proteome Transcription regulation

Gene Ontology (GO)

Displaying entries **1 - 5** of 21 in total

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GO Term	Evidence Code	Reference
ovarian follicle development	IMP	PMID
regulation of DNA repair	NAS	PMID
DNA-templated transcription	TAS	PMID
transcription, DNA-templated	TAS	PMID
DNA-templated transcription	IDA	PMID

GO Hierarchy

biological process

cellular process [inference]

metabolic process [inference]

biosynthetic process [inference]

macromolecule biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleobase-containing compound biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

mRNA transcription by RNA polymerase II

mRNA transcription [inference]

mRNA transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

protein-containing complex organization [inference]

protein-containing complex assembly [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

protein-DNA complex organization [inference]

protein-DNA complex assembly [inference]

transcription preinitiation complex assembly [inference]

RNA polymerase II preinitiation complex assembly

developmental process [inference]

anatomical structure development [inference]

ovarian follicle development

biological regulation [inference]

regulation of biological process [inference]

positive regulation of biological process [inference]

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of response to stimulus [inference]

regulation of response to stress [inference]

regulation of cellular response to stress [inference]

regulation of DNA repair

regulation of cellular process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA metabolic process [inference]

regulation of DNA repair

regulation of RNA metabolic process [inference]

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of primary metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of DNA metabolic process [inference]

regulation of DNA repair

regulation of RNA metabolic process [inference]

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of RNA biosynthetic process [inference]

regulation of DNA-templated transcription [inference]

regulation of transcription by RNA polymerase II

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of DNA-templated transcription initiation [inference]

regulation of transcription initiation by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of cellular process [inference]

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of RNA metabolic process [inference]

positive regulation of RNA biosynthetic process [inference]

positive regulation of transcription, DNA-templated

positive regulation of transcription by RNA polymerase II [inference]

positive regulation of transcription initiation by RNA polymerase II

positive regulation of DNA-templated transcription initiation [inference]

positive regulation of transcription initiation by RNA polymerase II

regulation of cellular response to stress [inference]

regulation of DNA repair

Displaying entries **1 - 5** of 13 in total

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GO Term	Evidence Code	Reference
chromatin	ISO	GO_REF
nucleus	ISO	GO_REF
nucleus	IDA	PMID PMID PMID
nucleus	IEA	GO_REF GO_REF
nucleoplasm	ISO	GO_REF

GO Hierarchy

cellular component

protein-containing complex

transcription regulator complex [inference]

RNA polymerase II transcription regulator complex [inference]

nuclear protein-containing complex [inference]

histone methyltransferase complex [inference]

MLL1/2 complex [inference]

MLL1 complex

RNA polymerase II transcription regulator complex [inference]

intracellular protein-containing complex [inference]

protein acetyltransferase complex [inference]

histone acetyltransferase complex [inference]

SAGA-type complex [inference]

transcription factor TFTC complex

catalytic complex [inference]

transferase complex [inference]

methyltransferase complex [inference]

histone methyltransferase complex [inference]

MLL1/2 complex [inference]

MLL1 complex

acetyltransferase complex [inference]

protein acetyltransferase complex [inference]

histone acetyltransferase complex [inference]

SAGA-type complex [inference]

transcription factor TFTC complex

cellular anatomical structure [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **1 - 5** of 7 in total

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GO Term	Evidence Code	Reference
core promoter sequence-specific DNA binding
DNA binding	IDA	PMID
DNA binding	IBA	GO_REF
RNA polymerase II general transcription initiation factor activity	ISO	GO_REF
RNA polymerase II general transcription initiation factor activity	IBA	GO_REF

GO Hierarchy

molecular function

binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding [inference]

core promoter sequence-specific DNA binding

DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

core promoter sequence-specific DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

core promoter sequence-specific DNA binding

protein binding [inference]

signaling receptor binding [inference]

aryl hydrocarbon receptor binding

transcription factor binding [inference]

DNA-binding transcription factor binding [inference]

RNA polymerase II-specific DNA-binding transcription factor binding [inference]

aryl hydrocarbon receptor binding

protein dimerization activity [inference]

protein heterodimerization activity

general transcription initiation factor activity [inference]

RNA polymerase II general transcription initiation factor activity

Gene Ontology information from UniProt.

Annotation information from UniProt.

Sequence

MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGNHVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRRPGSSSPRRLLVPAGPAPAPAKLRPLPEASAGPCPAAAAAAAATAAAVAGPDPAAAAPPAGPGASKPGPPGPPGPGAAQTLNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAAPSPPAAPAPAAPPPPAPPAPVAPARPPGHPAAPAPPVSPAAAAAAAAAAAAAQNGAAPAPAAASGGAAGLGQPGAGAQGAKAEAPKPGPGPGPGPAAAAAAAGVAGGGAAGSVLLGPAMPGALPGPAPGTPAGLAKGAAAATPSLPRTPAATTGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQPASLGTATAVQTGTPQRTVPGASTTSTAATETMENVKKCKSFLSTLIKLASSGKQSTETAANVKDLVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSSSVQRTAGKTAASVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCTGPGSGAEGSGPGAAVPGGSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK

N : N-glycosylation Site
___ : Potential Sequon

Glycosylation Sites

Displaying **all 4** entries
Position	PubMed ID	GlyTouCan ID	Source
192			GlyGen
355			GlyGen
367			GlyGen
486	21606357 22645316 40997131	G49108TO	GlyGen The O-GlcNAc Database

Feature

: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt

Pathway

Displaying **all 6** entries
Pathway Name	Organism
RNA Polymerase II Pre-transcription Events	Mus musculus
RNA Polymerase II Promoter Escape	Mus musculus
RNA Polymerase II Transcription Initiation	Mus musculus
RNA Polymerase II Transcription Initiation And Promoter Clearance	Mus musculus
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening	Mus musculus
Regulation of TP53 Activity through Phosphorylation	Mus musculus

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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