Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Guidelines
MIRAGE
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2

Summary
UniProt ID
O00469
Gene Symbol
  • PLOD2
Gene ID
5352
Organism
Homo sapiens (human)
GlycoProtDB
GPDB0011162
GlyConnect
GlyGen
O00469
PubChem
O00469
The Human Metabolome Database
HMDBP00461
The O-GlcNAc Database
O00469
RaftProt
O00469
O-GlcNAcAtlas
O00469
Re-Glyco
O00469
Annotation
Keyword
  • Alternative splicing
  • Dioxygenase
  • Disease variant
  • Endoplasmic reticulum
  • Glycoprotein
  • Iron
  • Membrane
  • Metal-binding
  • Osteogenesis imperfecta
  • Phosphoprotein
  • Reference proteome
  • Signal
  • Vitamin C
Gene Ontology (GO)
Displaying all 7 entries
GO Term
extracellular space
collagen-containing extracellular matrix
endoplasmic reticulum
endoplasmic reticulum membrane
Golgi apparatus
rough endoplasmic reticulum membrane
extracellular exosome
Subcellular Location(GO Annotation)

Subcellular in which this glycoprotein is expressed are highlighted in blue.

Annotation information from UniProt.
Sequence
MGGCTVKPQLLLLALVLHPWNPCLGADSEKPSSIPTDKLLVITVATKESDGFHRFMQSAKYFNYTVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHYADQDDLVVMFTECFDVIFAGGPEEVLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIGKRYLNSGGFIGYAPYVNRIVQQWNLQDNDDDQLFYTKVYIDPLKREAINITLDHKCKIFQTLNGAVDEVVLKFENGKARAKNTFYETLPVAINGNGPTKILLNYFGNYVPNSWTQDNGCTLCEFDTVDLSAVDVHPNVSIGVFIEQPTPFLPRFLDILLTLDYPKEALKLFIHNKEVYHEKDIKVFFDKAKHEIKTIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP
  • N : N-glycosylation Site
  • ___ : Potential Sequon
Glycosylation Sites
Displaying all 10 entries
Position Description PubMed ID GlyTouCan ID Source
33
63 N-linked (GlcNAc...) asparagine
209 N-linked (GlcNAc...) asparagine
297 N-linked (GlcNAc...) asparagine
365 N-linked (GlcNAc...) asparagine
522 N-linked (GlcNAc...) asparagine
696 N-linked (GlcNAc...) asparagine
698
725 N-linked (GlcNAc...) asparagine
727
Feature
  • ProtVista GlyGen : Glycosylation Site from GlyGen
  • ProtVista UniProt : Glycosylation Site from UniProt
Pathway
Displaying 1 entry
Pathway Name Organism
Collagen biosynthesis and modifying enzymes Homo sapiens
Disease
Displaying 1 entry
DO ID Disease Name Source
DOID:0060231 Bruck syndrome
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.3.0

Last updated: August 4, 2025