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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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MIRAGE
Heterogeneous nuclear ribonucleoprotein A1
Summary
- UniProt ID
- P09651
- Gene Symbol
- HNRNPA1 HNRPA1
- Gene ID
- 3178
- Organism
- Homo sapiens (human)
Annotation
- Keyword
- 3D-structure Acetylation Alternative splicing Amyotrophic lateral sclerosis Cytoplasm Direct protein sequencing Disease variant Host-virus interaction Isopeptide bond Methylation Nucleus Phosphoprotein Proteomics identification RNA-binding Reference proteome Repeat Ribonucleoprotein Spliceosome Ubl conjugation mRNA transport
Gene Ontology (GO)
| GO Term | Evidence Code | Reference |
|---|---|---|
| alternative mRNA splicing, via spliceosome |
|
|
| regulation of alternative mRNA splicing, via spliceosome | ||
| mRNA splicing, via spliceosome | ||
| mRNA splicing, via spliceosome | ||
| RNA export from nucleus |
GO Hierarchy
biological process
cellular process [inference]
response to stimulus [inference]
biological regulation [inference]
regulation of biological process [inference]
positive regulation of biological process [inference]
negative regulation of biological process [inference]
regulation of cellular process [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
negative regulation of metabolic process [inference]
positive regulation of metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of primary metabolic process [inference]
positive regulation of cellular process [inference]
negative regulation of cellular process [inference]
regulation of cellular component organization [inference]
| GO Term | Evidence Code | Reference |
|---|---|---|
| nucleus | ||
| nucleus | ||
| nucleus | ||
| nucleoplasm | ||
| nucleoplasm |
GO Hierarchy
| GO Term | Evidence Code | Reference |
|---|---|---|
| DNA binding | ||
| single-stranded DNA binding | ||
| RNA binding | ||
| RNA binding | ||
| single-stranded RNA binding |
GO Hierarchy
Sequence
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 22 |
|
|||
| 221 |
|
|||
| 337 |
|
|||
| 360 |
|
|||
| 361 |
|
|||
| 362 |
|
|||
| 363 |
|
|||
| 364 |
|
|||
| 365 |
|
|||
| 368 |
|
G49108TO
G31028YV
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| Dengue Virus-Host Interactions | Homo sapiens |
| FGFR2 alternative splicing | Homo sapiens |
| Processing of Capped Intron-Containing Pre-mRNA | Homo sapiens |
| SARS-CoV-1 modulates host translation machinery | Homo sapiens |
| SARS-CoV-1-host interactions | Homo sapiens |
| mRNA Polyadenylation | Homo sapiens |
| pre-mRNA splicing | Homo sapiens |
Human Protein Atlas
Tissue with high expression from Human Protein Atlas. Tissues that are highly expressed are highlighted.
Disease
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0111189 | distal myopathy 3 | |
| DOID:0060211 | amyotrophic lateral sclerosis type 20 | |
| DOID:321 | HTLV-1-associated myelopathy/tropical spastic paraparesis | |
| DOID:0111386 | inclusion body myopathy with early-onset Paget disease of bone with or without frontotemporal dementia 3 |
