Syndecan-1

Summary
UniProt ID
P26260
Gene Symbol
  • Sdc1
  • Synd1
Organism
Rattus norvegicus (Norway rat)
External Links
PubChem
P26260
Annotation
Keyword
  • Heparan sulfate
  • Phosphoprotein
  • Reference proteome
  • Secreted
  • Signal
  • Transmembrane helix
Gene Ontology (GO)
Sequence
MRRAALWLWLCALALRLQPALPQIVTANVPPEDQDGSGDDSDNFSGSGTGALPDMTLSRQTPSTWKDVWLLTATPTAPEPTSRDTEATLTSILPAGEKPEEGEPVAHVEAEPDFTARDKEKEATTRPRETTQLPVTQQASTAARATTAQASVTSHPHGDVQPGLHETLAPTAPGQPDHQPPSVEDGGTSVIKEVVEDETTNQLPAGEGSGEQDFTFETSGENTAVAGVEPDLRNQSPVDEGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA
Glycosylation Sites
Displaying all 6 entries
Position Description PubMed ID GlyTouCan ID Source
37 O-linked (Xyl...) (chondroitin sulfate) serine
43 N-linked (GlcNAc...) asparagine
45 O-linked (Xyl...) (heparan sulfate) serine
47 O-linked (Xyl...) (heparan sulfate) serine
209 O-linked (Xyl...) (chondroitin sulfate) serine
219 O-linked (Xyl...) (chondroitin sulfate) serine
Feature
  • ProtVista GlyGen : Glycosylation Site from GlyGen
  • ProtVista UniProt : Glycosylation Site from UniProt
Pathway
Displaying all 7 entries
Pathway Name Organism
A tetrasaccharide linker sequence is required for GAG synthesis Rattus norvegicus
Cell surface interactions at the vascular wall Rattus norvegicus
HS-GAG biosynthesis Rattus norvegicus
HS-GAG degradation Rattus norvegicus
Other interleukin signaling Rattus norvegicus
Retinoid metabolism and transport Rattus norvegicus
Syndecan interactions Rattus norvegicus

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024