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Syndecan-3
Summary
- UniProt ID
- Q64519
- Gene Symbol
-
- Kiaa0468
- Sdc3
- Gene ID
- 20970
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- Cell membrane
- Heparan sulfate
- Phosphoprotein
- Reference proteome
- Signal
- Transmembrane helix
- Gene Ontology (GO)
| GO Term |
|---|
| plasma membrane |
| membrane |
| Golgi lumen |
| microspike |
| GO Term |
|---|
| identical protein binding |
Sequence
MKPGPPRRGTAQGQRVDTATHAPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLEGSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDMALAAPTAPAMLPTTVIQPVDTPFEELLSEHPSPEPVTSPPLVTEVTEVVEESSQKATTISTTTSTTAATTTGAPTMATAPATAATTAPSTPEAPPATATVADVRTTGIQGMLPLPLTTAATAKITTPAAPSPPTTVATLDTEAPTPRLVNTATSRPRALPRPVTTQEPDVAERSTLPLGTTAPGPTEMAQTPTPESLLTTIQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGPGLHDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 78 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 80 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 82 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 89 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 107 | O-linked (GalNAc) threonine; by GALNT13 |
|
||
| 161 | O-linked (GalNAc) serine; by GALNT13 |
|
||
| 162 | O-linked (GalNAc) threonine; by GALNT13 |
|
||
| 163 | O-linked (GalNAc) threonine; by GALNT13 |
|
||
| 170 | O-linked (GalNAc) threonine; by GALNT13 |
|
||
| 172 | O-linked (GalNAc) threonine; by GALNT13 |
|
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| A tetrasaccharide linker sequence is required for GAG synthesis | Mus musculus |
| Cell surface interactions at the vascular wall | Mus musculus |
| HS-GAG biosynthesis | Mus musculus |
| HS-GAG degradation | Mus musculus |
| Retinoid metabolism and transport | Mus musculus |
| Syndecan interactions | Mus musculus |
