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Symplekin

Summary

UniProt ID: Q8MSU4
Gene Symbol: CG2097 Sym
Gene ID: 40709
Organism: Drosophila melanogaster (fruit fly)

External Links

PubChem: Q8MSU4
The O-GlcNAc Database: Q8MSU4
Re-Glyco: Q8MSU4

Annotation

Keyword: 3D-structure Coiled coil Nucleus RNA-binding Reference proteome Repeat mRNA processing

Gene Ontology (GO)

Displaying **all 2** entries
GO Term	Evidence Code	Reference
mRNA 3'-end processing by stem-loop binding and cleavage	IMP	PMID PMID PMID
co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway	IMP	PMID

GO Hierarchy

biological process

cellular process [inference]

metabolic process [inference]

macromolecule metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA processing [inference]

mRNA 3'-end processing [inference]

histone mRNA metabolic process [inference]

mRNA 3'-end processing by stem-loop binding and cleavage

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA metabolic process [inference]

mRNA processing [inference]

mRNA 3'-end processing [inference]

histone mRNA metabolic process [inference]

mRNA 3'-end processing by stem-loop binding and cleavage

RNA processing [inference]

mRNA processing [inference]

mRNA 3'-end processing [inference]

RNA 3'-end processing [inference]

mRNA 3'-end processing [inference]

co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway [inference]

co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	Reference
nucleus	IDA	PMID
nucleus	IEA	GO_REF GO_REF
mRNA cleavage and polyadenylation specificity factor complex	IDA	PMID
mRNA cleavage and polyadenylation specificity factor complex	IBA	GO_REF
histone locus body	IDA	PMID PMID

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

mRNA cleavage factor complex [inference]

mRNA cleavage and polyadenylation specificity factor complex

cellular anatomical structure [inference]

cell junction [inference]

anchoring junction [inference]

cell-cell junction [inference]

tight junction [inference]

tricellular tight junction

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

membraneless organelle [inference]

intracellular membraneless organelle [inference]

nuclear body [inference]

nuclear ribonucleoprotein granule [inference]

histone locus body

ribonucleoprotein granule [inference]

nuclear ribonucleoprotein granule [inference]

histone locus body

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular membraneless organelle [inference]

nuclear body [inference]

nuclear ribonucleoprotein granule [inference]

histone locus body

ribonucleoprotein granule [inference]

nuclear ribonucleoprotein granule [inference]

histone locus body

supramolecular complex [inference]

ribonucleoprotein granule [inference]

nuclear ribonucleoprotein granule [inference]

histone locus body

Displaying 1 entry
GO Term	Evidence Code	Reference
RNA binding

GO Hierarchy

molecular function

binding [inference]

nucleic acid binding [inference]

RNA binding

Gene Ontology information from UniProt.

Annotation information from UniProt.

Sequence

MDSIIGRSQFVSETANLFTDEKTATARAKVVDWCNELVIASPSTKCELLAKVQETVLGSCAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVVVLQSFADEDSLKRDGDFSLADVPDHCTLFRREKLQEEGNNILDILLQFHGTTHISSVNLIACTSSLCTIAKMRPIFMGAVVEAFKQLNANLPPTLTDSQVSSVRKSLKMQLQTLLKNRGAFEFASTIRGMLVDLGSSTNEIQKLIPKMDKQEMARRQKRILENAAQSLAKRARLACEQQDQQQREMELDTEELERQKQKSTRVNEKFLAEHFRNPETVVTLVLEFLPSLPTEVPQKFLQEYTPIREMSIQQQVTNISRFFGEQLSEKRLGPGAATFSREPPMRVKKVQAIESTLTAMEVDEDAVQKLSEEEFQRKEEATKKLRETMERAKGEQTVIEKMKERAKTLKLQEITKPLPRNLKEKFLTDAVRRILNSERQCIKGGVSSKRRKLVTVIAATFPDNVRYGIMEFILEDIKQRIDLAFSWLFEEYSLLQGFTRHTYVKTENRPDHAYNELLNKLIFGIGERCDHKDKIILIRRVYLEAPILPEVSIGHLVQLSLDDEFSQHGLELIKDLAVLRPPRKNRFVRVLLNFSVHERLDLRDLAQAHLVSLYHVHKILPARIDEFALEWLKFIEQESPPAAVFSQDFGRPTEEPDWREDTTKVCFGLAFTLLPYKPEVYLQQICQVFVSTSAELKRTILRSLDIPIKKMGVESPTLLQLIEDCPKGMETLVIRIIYILTERVPSPHEELVRRVRDLYQNKVKDVRVMIPVLSGLTRSELISVLPKLIKLNPAVVKEVFNRLLGIGAEFAHQTMAMTPTDILVALHTIDTSVCDIKAIVKATSLCLAERDLYTQEVLMAVLQQLVEVTPLPTLMMRTTIQSLTLYPRLANFVMNLLQRLIIKQVWRQKVIWEGFLKTVQRLKPQSMPILLHLPPAQLVDALQQCPDLRPALSEYAESMQDEPMNGSGITQQVLDIISGKSVDVFVTDESGGYISAEHIKKEAPDPSEISVISTVPVLTSLVPLPVPPPIGSDLNQPLPPGED

N : N-glycosylation Site
___ : Potential Sequon

Glycosylation Sites

Displaying **all 2** entries
Position	Description	PubMed ID	GlyTouCan ID	Source
1000		40245499	G49108TO	The O-GlcNAc Database
1001		40245499	G49108TO	The O-GlcNAc Database

Feature

: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt

Pathway

Displaying **all 4** entries
Pathway Name	Organism
Processing of Intronless Pre-mRNAs	Drosophila melanogaster
RNA Polymerase II Transcription Termination	Drosophila melanogaster
Transport of Mature mRNA Derived from an Intronless Transcript	Drosophila melanogaster
mRNA Polyadenylation	Drosophila melanogaster

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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