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Histone H3-lysine(4) N-trimethyltransferase ATX1

Summary

UniProt ID: Q9C5X4
Gene Symbol: ATX1 At2g31650 SDG27 SET27 T9H9.17 TRX1
Gene ID: 817721
Organism: Arabidopsis thaliana (thale cress)

External Links

GlyGen: Q9C5X4
The O-GlcNAc Database: Q9C5X4
Re-Glyco: Q9C5X4

Annotation

Keyword: Abscisic acid signaling pathway Alternative splicing Chromatin regulator Cytoplasm Direct protein sequencing Glycoprotein Methyltransferase Nucleus Reference proteome Repeat S-adenosyl-L-methionine Stress response Transcription regulation Zinc-finger

Gene Ontology (GO)

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GO Term	Evidence Code	Reference
chromatin remodeling	IMP	PMID
regulation of DNA-templated transcription	IMP	PMID
regulation of transcription, DNA-templated	IMP	PMID
regulation of DNA-templated transcription	IEA	GO_REF
regulation of transcription, DNA-templated	IEA	GO_REF

GO Hierarchy

biological process

cellular process [inference]

signal transduction [inference]

hormone-mediated signaling pathway [inference]

abscisic acid-activated signaling pathway

metabolic process [inference]

methylation

macromolecule methylation [inference]

protein methylation [inference]

peptidyl-lysine methylation

macromolecule metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein alkylation [inference]

protein methylation [inference]

peptidyl-lysine methylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine methylation

macromolecule modification [inference]

protein modification process [inference]

protein alkylation [inference]

protein methylation [inference]

peptidyl-lysine methylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine methylation

macromolecule methylation [inference]

protein methylation [inference]

peptidyl-lysine methylation

primary metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein alkylation [inference]

protein methylation [inference]

peptidyl-lysine methylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine methylation

actin filament-based process [inference]

actin cytoskeleton organization

cellular component organization or biogenesis [inference]

cellular component organization [inference]

chromatin organization [inference]

chromatin remodeling

epigenetic regulation of gene expression

organelle organization [inference]

cytoskeleton organization [inference]

actin cytoskeleton organization

reproductive process [inference]

developmental process involved in reproduction [inference]

multicellular organismal process [inference]

pattern specification process [inference]

regionalization [inference]

specification of plant organ identity [inference]

specification of floral organ identity

developmental process [inference]

developmental process involved in reproduction [inference]

anatomical structure arrangement [inference]

quiescent center organization

response to stimulus [inference]

response to stress [inference]

response to water deprivation

response to abiotic stimulus [inference]

response to water [inference]

response to water deprivation

response to chemical [inference]

response to acid chemical [inference]

response to water [inference]

response to water deprivation

response to oxygen-containing compound [inference]

response to water [inference]

response to water deprivation

biological regulation [inference]

regulation of biological process [inference]

negative regulation of biological process [inference]

negative regulation of developmental process [inference]

negative regulation of post-embryonic development [inference]

negative regulation of flower development

negative regulation of multicellular organismal process [inference]

negative regulation of post-embryonic development [inference]

negative regulation of flower development

negative regulation of reproductive process [inference]

negative regulation of flower development

regulation of developmental process [inference]

regulation of anatomical structure morphogenesis [inference]

regulation of plant organ morphogenesis [inference]

regulation of root morphogenesis

regulation of shoot system development [inference]

regulation of flower development

negative regulation of flower development

negative regulation of developmental process [inference]

negative regulation of post-embryonic development [inference]

negative regulation of flower development

regulation of multicellular organismal development [inference]

regulation of post-embryonic development [inference]

regulation of flower development

negative regulation of flower development

negative regulation of post-embryonic development [inference]

negative regulation of flower development

regulation of post-embryonic root development [inference]

regulation of lateral root development

regulation of root development

regulation of post-embryonic root development [inference]

regulation of lateral root development

regulation of cellular process [inference]

signal transduction [inference]

hormone-mediated signaling pathway [inference]

abscisic acid-activated signaling pathway

regulation of stomatal movement [inference]

regulation of stomatal closure

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

epigenetic regulation of gene expression

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

epigenetic regulation of gene expression

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

regulation of RNA metabolic process [inference]

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

regulation of primary metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of transcription by RNA polymerase II

regulation of multicellular organismal process [inference]

negative regulation of multicellular organismal process [inference]

negative regulation of post-embryonic development [inference]

negative regulation of flower development

regulation of multicellular organismal development [inference]

regulation of post-embryonic development [inference]

regulation of flower development

negative regulation of flower development

negative regulation of post-embryonic development [inference]

negative regulation of flower development

regulation of post-embryonic root development [inference]

regulation of lateral root development

regulation of reproductive process [inference]

regulation of flower development

negative regulation of flower development

negative regulation of reproductive process [inference]

negative regulation of flower development

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GO Term	Evidence Code	Reference
chromatin	IDA	PMID
nucleus	ISM	GO_REF
nucleus	IDA	PMID PMID
nucleus	IEA	GO_REF GO_REF
cytoplasm	EXP	PMID

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

histone methyltransferase complex [inference]

Set1C/COMPASS complex

catalytic complex [inference]

transferase complex [inference]

methyltransferase complex [inference]

histone methyltransferase complex [inference]

Set1C/COMPASS complex

cellular anatomical structure [inference]

membrane [inference]

plasma membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

perinuclear region of cytoplasm

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GO Term	Evidence Code	Reference
transcription cis-regulatory region binding	IDA	PMID
chromatin binding	IDA	PMID
zinc ion binding
protein methyltransferase activity	IMP	PMID
phosphatidylinositol-5-phosphate binding	IDA	PMID

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring one-carbon groups [inference]

methyltransferase activity [inference]

N-methyltransferase activity [inference]

lysine N-methyltransferase activity [inference]

protein-lysine N-methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

protein methyltransferase activity

protein-lysine N-methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

histone methyltransferase activity [inference]

histone H3 methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

S-adenosylmethionine-dependent methyltransferase activity [inference]

lysine N-methyltransferase activity [inference]

protein-lysine N-methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

catalytic activity, acting on a protein [inference]

protein methyltransferase activity

protein-lysine N-methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

histone methyltransferase activity [inference]

histone H3 methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

histone modifying activity [inference]

histone methyltransferase activity [inference]

histone H3 methyltransferase activity [inference]

histone H3K4 methyltransferase activity

histone H3K4 trimethyltransferase activity

binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding

DNA binding [inference]

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

chromatin binding

lipid binding [inference]

phospholipid binding [inference]

phosphatidylinositol phosphate binding [inference]

phosphatidylinositol-5-phosphate binding

small molecule binding [inference]

ion binding [inference]

anion binding [inference]

phosphatidylinositol-5-phosphate binding

cation binding [inference]

metal ion binding [inference]

transition metal ion binding [inference]

zinc ion binding

Gene Ontology information from UniProt.

Annotation information from UniProt.

Sequence

MACFSNETQIEIDVHDLVEAPIRYDSIESIYSIPSSALCCVNAVGSHSLMSKKVKAQKLPMIEQFEIEGSGVSASDDCCRSDDYKLRIQRPEIVRVYYRRRKRPLRECLLDQAVAVKTESVELDEIDCFEEKKRRKIGNCELVKSGMESIGLRRCKENNAFSGNKQNGSSRRKGSSSKNQDKATLASRSAKKWVRLSYDGVDPTSFIGLQCKVFWPLDALWYEGSIVGYSAERKRYTVKYRDGCDEDIVFDREMIKFLVSREEMELLHLKFCTSNVTVDGRDYDEMVVLAATLDECQDFEPGDIVWAKLAGHAMWPAVIVDESIIGERKGLNNKVSGGGSLLVQFFGTHDFARIKVKQAISFIKGLLSPSHLKCKQPRFEEGMQEAKMYLKAHRLPERMSQLQKGADSVDSDMANSTEEGNSGGDLLNDGEVWLRPTEHVDFRHIIGDLLIINLGKVVTDSQFFKDENHIWPEGYTAMRKFTSLTDHSASALYKMEVLRDAETKTHPLFIVTADSGEQFKGPTPSACWNKIYNRIKKVQNSDSPNILGEELNGSGTDMFGLSNPEVIKLVQDLSKSRPSSHVSMCKNSLGRHQNQPTGYRPVRVDWKDLDKCNVCHMDEEYENNLFLQCDKCRMMVHAKCYGELEPCDGALWLCNLCRPGAPDMPPRCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLSDVKKMEPIDGVNKVSKDRWKLMCTICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENDMSVEGEEADQCIRMLSFCKRHRQTSTACLGSEDRIKSATHKTSEYLPPPNPSGCARTEPYNCFGRRGRKEPEALAAASSKRLFVENQPYVIGGYSRLEFSTYKSIHGSKVSQMNTPSNILSMAEKYRYMRETYRKRLAFGKSGIHGFGIFAKLPHRAGDMMIEYTGELVRPSIADKREQLIYNSMVGAGTYMFRIDDERVIDATRTGSIAHLINHSCVPNCYSRVITVNGDEHIIIFAKRHIPKWEELTYDYRFFSIGERLSCSCGFPGCRGVVNDTEAEEQHAKICVPRCDLIDWTAE

N : N-glycosylation Site
___ : Potential Sequon

Glycosylation Sites

Displaying **all 2** entries
Position	Description	PubMed ID	GlyTouCan ID	Source
523				GlyGen
947	O-linked (GlcNAc) serine	30150325	G49108TO	UniProt GlyGen The O-GlcNAc Database

Feature

: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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