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Repository for lectin-assisted multimodality data

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Guidelines

MIRAGE

glucosaminyl (N-acetyl) transferase 4

Summary

Gene Symbol

gcnt4

Organism

Xenopus tropicalis (tropical clawed frog)

External Links

NCBI Gene

100492495

KEGG Gene ID

xtr:100492495

PubChem

100492495

Alliance of Genome Resources

Xenbase:XB-GENE-1011770

Annotation

Keyword

Glycoprotein
Glycosyltransferase
Reference proteome
Signal-anchor
Transmembrane helix

Proteins

Displaying 1 entry
UniProt	Protein Name
F6WAZ3

Annotation information from UniProt.

Gene Ontology (GO)

Displaying 1 entry
GO Term	Evidence Code	PMID
U2 snRNA 3'-end processing	IBA

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

RNA 3'-end processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

ncRNA processing [inference]

snRNA processing [inference]

snRNA 3'-end processing [inference]

U2 snRNA 3'-end processing

Displaying **all 3** entries
GO Term	Evidence Code	PMID
Golgi membrane	IEA
membrane	IEA
integrator complex	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

integrator complex

cellular anatomical entity [inference]

organelle membrane [inference]

bounding membrane of organelle [inference]

Golgi membrane

Displaying 1 entry
GO Term	Evidence Code	PMID
glycosyltransferase activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

beta-1,3-galactosyl-o-glycosyl-glycoprotein beta-1,6-n-acetylglucosaminyltransferase

Functional Category

M: Cell wall/membrane/envelope biogenesis
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
transferase activity

KEGG BRITE Database

Orthology

K09663

Name

beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]

References

Reactions

Displaying 1 entry
KEGG Reaction	Enzyme	Acceptor	Product
R05912	2.4.1.102	G00031MO	G00033MO

Ortholog

Displaying entries **11 - 20** of 22 in total

« First

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Last »
Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Danio rerio	173114	ZFIN:ZDB-GENE-091118-69
Danio rerio	218476	ZFIN:ZDB-GENE-091118-69
Caenorhabditis elegans	286976	WB:WBGene00001643
Caenorhabditis elegans	306860	WB:WBGene00001643
Danio rerio	324510	ZFIN:ZDB-GENE-030131-3231
Caenorhabditis elegans	654821	WB:WBGene00001643
Caenorhabditis elegans	100038221	WB:WBGene00001643
Caenorhabditis elegans	100332076	WB:WBGene00001643
Caenorhabditis elegans	100486342	WB:WBGene00001643
Caenorhabditis elegans	100486486	WB:WBGene00001643

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Last updated: August 4, 2025