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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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GALAXY
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G06209KS
Summary
- GlyTouCan ID
-
G06209KS
- IUPAC Condensed
- Neu5Ac(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan core basic N-acetyllactosamine Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1566.56
3D Structures
Organisms
| Organisms | Evidence |
|---|---|
| Homo sapiens (human) |
Taxonomic Hierarchy
GALAXY
Glucose Units
- ODS
- 7.8
- Amide
- 6
- Degrading Enzymes
G84852GW
G69411IG
G22795QB
G30844CL
G46314PI
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P01215 | Glycoprotein hormones alpha chain | ||
| P01229 | Lutropin subunit beta | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P01877 | Immunoglobulin heavy constant alpha 2 | ||
| P04004 | Vitronectin | ||
| P06731 | Cell adhesion molecule CEACAM5 | ||
| P0DOX2 | Immunoglobulin alpha-2 heavy chain |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dman-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(6+2)10d 10:10d(5+1)11n 11:5o(6+1)12d
- WURCS
- WURCS=2.0/5,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-1-2-3-1-4-5-3/a4-b1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f6-g2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 33383989 | Bisecting GlcNAc Protein N-Glycosylation Is Characteristic of Human Adipogenesis | Wongtrakul-Kish K | 2021 Feb 5 |
|
| 9449027 | Carbohydrate and peptide structure of the alpha- and beta-subunits of human chorionic gonadotropin from normal and aberrant pregnancy and choriocarcinoma | Elliott MM | 1997 Aug |
|
| 7541354 | Structures of the N-Linked Oligosaccharides on Human Plasma Vitronectin | Ogawa H | 1995 Jun 15 |
|
| 8026573 | Rapid and simple approach for the NMR resonance assignment of the carbohydrate chains of an intact glycoprotein Application of gradient‐enhanced natural abundance 1H‐13C HSQC and HSQC‐TOCSY to the α‐subunit of human chorionic gonadotropin | de Beer T | 1994 Jul 04 |
|
| 1820200 | Site-specific N-glycosylation of human chorionic gonadotrophin--structural analysis of glycopeptides by one- and two-dimensional 1H NMR spectroscopy | Weisshaar G | 1991 Sep |
|
| 1991473 | NMR investigations of the N-linked oligosaccharides at individual glycosylation sites of human lutropin | WEISSHAAR G | 1991 Jan 01 |
|
