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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G10820KD
Summary
- GlyTouCan ID
-
G10820KD
- IUPAC Condensed
- Gal(b1-4)[Fuc(a1-?)]GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-4)][GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- Lewis x Lex N-Glycan complex N-acetyllactosamine SSEA-1 Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1973.73
External Links
- GlyGen
3D Structures
- GlycoShape
- G10820KD
Organisms
| Organisms | Evidence |
|---|---|
| Rattus norvegicus (Norway rat) |
Taxonomic Hierarchy
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| D4A435 | Intercellular adhesion molecule 5 | ||
| O35764 | Neuronal pentraxin receptor | ||
| P07340 | Sodium/potassium-transporting ATPase subunit beta-1 | ||
| P14841 | Cystatin-C | ||
| P26453 | Basigin | ||
| P47971 | Neuronal pentraxin-1 | ||
| P70627 | Glutamate carboxypeptidase 2 | ||
| P97546 | Neuroplastin | ||
| P97603 | Neogenin (Fragment) | ||
| P97686 | Neuronal cell adhesion molecule |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8b:a-lgal-HEX-1:5|6:d 9s:n-acetyl 10b:b-dgal-HEX-1:5 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7o(-1+1)8d 8:7d(2+1)9n 9:7o(4+1)10d 10:5o(4+1)11d 11:11d(2+1)12n 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:1o(6+1)16d
- WURCS
- WURCS=2.0/5,11,10/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5]/1-1-2-3-1-4-5-1-3-1-4/a4-b1_a6-k1_b4-c1_c3-d1_c4-h1_c6-i1_d2-e1_e4-g1_i2-j1_e?-f1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 24090084 | Site-Specific Glycan-Peptide Analysis for Determination of N-Glycoproteome Heterogeneity | Parker BL | 2013 Dec 6 |
|
