Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B3GALT1 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALNT3 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B3GALNT2 | UDP-GalNAc |
G49108TO
|
R |
G36387CV
|
R | |
| B4GALNT4 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B4GALT1 | UDP-Glc |
G49108TO
|
R |
G38884XS
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9NPR9 | Protein GPR108 | ||
| Q9NQ66 | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 | ||
| Q9NQ76 | Matrix extracellular phosphoglycoprotein | ||
| Q9NQ90 | Anoctamin-2 | ||
| Q9NQC3 | Reticulon-4 | ||
| Q9NQG7 | BLOC-3 complex member HPS4 | ||
| Q9NQI0 | Probable ATP-dependent RNA helicase DDX4 | ||
| Q9NQL9 | Doublesex- and mab-3-related transcription factor 3 | ||
| Q9NQR1 | N-lysine methyltransferase KMT5A | ||
| Q9NQR8 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 541450 | Methylation analysis in glycoprotein chemistry. General procedure for quantification of the products of solvolysis of permethylated glycopeptides and glycoproteins | Akhrem AA | 1979 Nov 28 |
|
| 497242 | Characteristics of the chitin-synthesizing system of insect tissue | Vardanis A | 1979 Nov 15 |
|
| 534537 | The effects of triton X-100 on the transfer of mannose, glucose and N-acetylglusomine phosphate to dolichol monophosphate by preparations of rough and smooth endoplasmic reticulum and of mitochondria of rat liver | Coolbear T | 1979 Nov 15 |
|
| 500611 | Adhesion of hepatocytes to immobilized sugars. A threshold phenomenon. | Weigel PH | 1979 Nov 10 |
|
| 92996 | Interaction of wheat germ agglutinin with sialic acid | Peters BP | 1979 Nov 01 |
|
| 541666 | Sequence Analysis of Lactosamine Type Glycans of Individual Membrane Proteins of Semliki Forest Virus | Pesonen M | 1979 Nov 01 |
|
| 118744 | Specific interaction of human Tamm-Horsfall gylcoprotein with leucoagglutinin, a lectin from Phaseolus vulgaris (red kidney bean) | Serafini-Cessi F | 1979 Nov 01 |
|
| 94066 | Metabolism of N-Acetylglucosamine and Glucose in Membranes from Lactating Bovine Mammary Tissue | Lewis DE | 1979 Nov |
|
| 94598 | Lectins in diagnostic microbiology: use of wheat germ agglutinin for laboratory identification of Neisseria gonorrhoeae | Schaefer RL | 1979 Nov |
|
| 160243 | Pretibial myxoedema: stilmulation of mucopolysaccharide production of fibroblasts by serum | KOLLIFFE DS | 1979 Nov |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
