GlyCosmos Portal

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3D Structures

GLYCAM: DGlcpNAcb1-OH

GlycoShape

G49108TO

Displaying 1 entry
Archetype	α	β
G14843DJ	G68544GH	G49108TO

Organisms

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Organisms	Evidence
Streptococcus pneumoniae	GlyTouCan(bcsdb)
Mus musculus (house mouse)	GlyConnectStructure GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB) GlyGen(UniCarbKB) GlycoEpitope
Saccharomyces cerevisiae (brewer's yeast)	GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB)
Sus scrofa (pig)	GlyGen(OGlcNAcAtlas)
Rattus norvegicus (Norway rat)	GlyConnectStructure GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB) GlyGen(UniCarbKB) GlycoEpitope

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus [inference]

Rattus norvegicus (Norway rat)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Laurasiatheria [inference]

Artiodactyla (even-toed ungulates & whales) [inference]

Suina [inference]

Suidae (pigs) [inference]

Sus [inference]

Sus scrofa (pig)

Protostomia [inference]

Ecdysozoa [inference]

Panarthropoda [inference]

Arthropoda (arthropods) [inference]

Mandibulata [inference]

Pancrustacea [inference]

Hexapoda (hexapods) [inference]

Insecta (insects) [inference]

Dicondylia [inference]

Pterygota (winged insects) [inference]

Neoptera [inference]

Endopterygota [inference]

Diptera (flies) [inference]

Brachycera [inference]

Muscomorpha [inference]

Eremoneura [inference]

Cyclorrhapha [inference]

Schizophora [inference]

Acalyptratae [inference]

Ephydroidea [inference]

Drosophilidae (pomace flies) [inference]

Drosophilinae [inference]

Drosophilini [inference]

Drosophila (fruit flies) [inference]

Sophophora [inference]

melanogaster group [inference]

melanogaster subgroup [inference]

Drosophila melanogaster (fruit fly)

Fungi [inference]

Dikarya [inference]

Ascomycota (ascomycetes) [inference]

saccharomyceta [inference]

Saccharomycotina (true yeasts) [inference]

Saccharomycetes [inference]

Saccharomycetales [inference]

Saccharomycetaceae [inference]

Saccharomyces [inference]

Saccharomyces cerevisiae (brewer's yeast)

Bacteria (eubacteria) [inference]

Terrabacteria group [inference]

Bacillota [inference]

Bacilli [inference]

Lactobacillales [inference]

Streptococcaceae [inference]

Streptococcus [inference]

Streptococcus pneumoniae

Viruses [inference]

Riboviria [inference]

Orthornavirae [inference]

Negarnaviricota [inference]

Polyploviricotina [inference]

Insthoviricetes [inference]

Articulavirales [inference]

Orthomyxoviridae [inference]

unclassified Orthomyxoviridae [inference]

unidentified influenza virus

GlycoGene Database (GGDB)

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G49108TO	[beta]-S-pNP	G00055MO	[beta]-S-pNP	9435216
B4GALT1	UDP-Gal	G49108TO	R	G00055MO	R	3014508
B4GALT2	UDP-Gal	G49108TO	Benzyl-[beta]	G00055MO	Benzyl-[beta]	9405390
B3GALT2	UDP-Gal	G49108TO	Lemieux	G00056MO	Lemieux	9417100
B3GALT5	UDP-Gal	G49108TO	R	G00056MO	R	10212226

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G49108TO	[beta]-S-pNP	G00055MO	[beta]-S-pNP	9435216
B4GALT4	UDP-Gal	G49108TO	[beta]-1-thio-p-Nitrophenyl	G00055MO	[beta]-1-thio-p-Nitrophenyl	9792633
B4GALT3	UDP-Gal	G49108TO	4-Me-lumbelyl-[beta]	G00055MO	4-Me-lumbelyl-[beta]	9405390
B4GALT4	UDP-Gal	G49108TO	[beta]-1-4-methyl-umbelliferyl	G00055MO	[beta]-1-4-methyl-umbelliferyl	9792633
B4GALT1	UDP-Gal	G49108TO		G00055MO		10580128

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
B4GALT2	UDP-Gal	G49108TO	p-Nitrophenyl-[beta]	9405390
B4GALT3	UDP-Gal	G49108TO		9405390
B4GALT4	UDP-Gal	G49108TO		9792633
B3GNT2	UDP-Gal	G49108TO	[beta]1-OBn	9892646
B4GALT2	UDP-Gal	G49108TO	p-Nitrophenyl-1-thio-[beta]	9405390

KEGG BRITE Database

KEGG ID

Enzyme

2.4.1.255

Core Protein

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UniProt ID	Protein Name	Reference	Source
Q9H3K2	Growth hormone-inducible transmembrane protein	28510447 30379171 34725712	GlyGen The O-GlcNAc Database
Q9H3P2	Negative elongation factor A	28510447 29485866 32119511 34019948 35138101 37340703 38665916 39302247	The O-GlcNAc Database
Q9H3Q1	Cdc42 effector protein 4	30379171	GlyGen The O-GlcNAc Database
Q9H3R0	Lysine-specific demethylase 4C	38253038	The O-GlcNAc Database
Q9H3S7	Tyrosine-protein phosphatase non-receptor type 23	23301498 27655845 29237092 29351928 30059200 31492838 32119511 32870666 33214551 34019948 34725712 35138101 35289036 37217939 38665916 39531497	GlyGen The O-GlcNAc Database
Q9H3U1	Protein unc-45 homolog A	23301498 30379171 34019948 38665916	GlyGen The O-GlcNAc Database
Q9H3U7	SPARC-related modular calcium-binding protein 2	30620550	GlyGen The O-GlcNAc Database
Q9H3Z7	ABHD16B		GlyGen
Q9H410	Kinetochore-associated protein DSN1 homolog		GlyGen
Q9H422	Homeodomain-interacting protein kinase 3	32938750	GlyGen

GlycoEpitope

Epitope ID: EP0004

Pathway

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Pathway Name	Organism
Antimicrobial peptides	Sus scrofa
Antimicrobial peptides	Rattus norvegicus
Antimicrobial peptides	Dictyostelium discoideum
Antimicrobial peptides	Bos taurus
Antimicrobial peptides	Canis familiaris
Antimicrobial peptides	Mus musculus
Antimicrobial peptides	Gallus gallus
Antimicrobial peptides	Homo sapiens
Antimicrobial peptides	Drosophila melanogaster
Antimicrobial peptides	Xenopus tropicalis

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
LIN
1:1d(2+1)2n

WURCS

WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/

Literature

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PubMed ID	Title	First Author	Publication Date	Source
934180	Pathogenicity of a Gibberellin-Producing and a Nonproducing Strain of Fusarium Moniliforme in Oats as Determined by a Colorimetri Assay for N-Acetyl Glucosamine	Zak JC	1976 Jan	PubChem
1241284	The influence of urea and guanidine chloride on the binding of the binding of the bacterial substrate and inhibitors to hen lysozyme at physiological temperature (40 degrees) (*)	Saint-Blancard J	1976 Jan	PubChem
1377	Purification and properties of beta-N-acetylglucosaminidase from Escherichia coli	Yem DW	1976 Jan	PubChem
814123	An activator stimulating the enzymic hydrolysis of sphingoglycolipids.	Li SC	1976 Feb 25	PubChem
1252468	The effect of cycloheximide on galactosyltransferase of rat liver Golgi membranes	MITRANIC M	1976 Feb 24	PubChem
943183	On the significance of the carbohydrate moieties of bovine prothrombin for clotting activity	HENRIKSEN A	1976 Feb 24	PubChem
943181	[Studies on the cell wall of yeast of the genus Rhodotorula. X. Isolation and purification of cell-wall glycoproteins from Rhodotorula rubra (author's transl)]	Moulki H	1976 Feb 20	PubChem
1255720	Structures of triclinic mono- and di-N-acetylglucosamine: lysozyme complexes--a crystallographic study	Kurachi K	1976 Feb 15	PubChem
1259720	Binding of glycoproteins of microsomal and Golgi membranes to lectins	Winqvist L	1976 Feb 09	PubChem
129339	The interaction of wheat germ agglutinin with keratan from cornea and nasal cartilage	Carlsson HE	1976 Feb 01	PubChem

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

KEGG BRITE Database

GlycoEpitope

Sequence Descriptors

International Collaboration

Acknowledgements