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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
- 9 3780 3968 4708 25653 28493 29021 29527 29549 31775 32028 32903 33539 36048 36270 37035 37525 37675 37677 37678 39452 39454 39456 39609 39611 39613 39614 40149 40150 40151 40355 40591 40600 42059 42207 42220 43184 43893 43925 43926 43931 43932 43941 44395 44396 44397 44549 46453 47268 47468 47537 47603 47796 48630 48812 48813 49006 49732 50589 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Streptococcus pneumoniae | |
| Mus musculus (house mouse) | |
| Saccharomyces cerevisiae (brewer's yeast) | |
| Sus scrofa (pig) | |
| Rattus norvegicus (Norway rat) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
4-Me-lumbelyl-[beta] |
G00055MO
|
4-Me-lumbelyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-thio-p-Nitrophenyl |
G00055MO
|
[beta]-1-thio-p-Nitrophenyl | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl | |
| B4GALT1 | UDP-Gal |
G49108TO
|
G00055MO
|
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| B4GALT2 | UDP-Gal |
G49108TO
|
4-Me-lumbelyl-[beta] | |
| B4GALT7 | UDP-Gal |
G49108TO
|
Benzyl-[beta] | |
| B4GALT2 | UDP-Gal |
G49108TO
|
||
| B4GALT7 | UDP-Gal |
G49108TO
|
4-D-MethylUmb-[beta] | |
| B3GNT2 | UDP-GalNAc |
G49108TO
|
[beta]1-OBn |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9H269 | Vacuolar protein sorting-associated protein 16 homolog | ||
| Q9H270 | Vacuolar protein sorting-associated protein 11 homolog | ||
| Q9H2C0 | Gigaxonin | ||
| Q9H2D6 | TRIO and F-actin-binding protein | ||
| Q9H2F5 | Enhancer of polycomb homolog 1 | ||
| Q9H2G2 | STE20-like serine/threonine-protein kinase | ||
| Q9H2P0 | Activity-dependent neuroprotector homeobox protein | ||
| Q9H2T7 | Ran-binding protein 17 | ||
| Q9H2U2 | Inorganic pyrophosphatase 2, mitochondrial | ||
| Q9H2W6 | Large ribosomal subunit protein mL46 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Sus scrofa |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Mus musculus |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 37934975 | Novel Calcium-Binding Motif Stabilizes and Increases the Activity of Aspergillus fumigatus Ecto-NADase | Ferrario E | 2023 Nov 07 |
|
| 37932445 | Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity | Zheng L | 2023 Nov 06 |
|
| 37958983 | Integrating Embeddings from Multiple Protein Language Models to Improve Protein O-GlcNAc Site Prediction | Pokharel S | 2023 Nov 06 |
|
| 37924140 | Amino acid metabolism reprogramming: shedding new light on T cell anti-tumor immunity | Zheng Y | 2023 Nov 03 |
|
| 37919470 | Structural insights into asymmetric activation of the calcium-sensing receptor–Gq complex | Ling S | 2023 Nov 02 |
|
| 37914842 | Benchmark Glycan Profile of Therapeutic Monoclonal Antibodies Produced by Mammalian Cell Expression Systems | Luo S | 2023 Nov 01 |
|
| 37838167 | On a sugar high: Role of O-GlcNAcylation in cancer | Le Minh G | 2023 Nov |
|
| 37586141 | Identification of salivary metabolic biomarker signatures for oral tongue squamous cell carcinoma | Vimal J | 2023 Nov |
|
| 37945229 | Molecular mechanism of Osthole against chitin synthesis of Ustilaginoidea virens based on combined transcriptome and metabolome analyses | Hu X | 2023 Nov |
|
| 37820866 | Growing and dividing: how O-GlcNAcylation leads the way | Saunders H | 2023 Nov |
|
