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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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MIRAGE
G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GlycoNAVI
- G49108TO
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y2R4 | Probable ATP-dependent RNA helicase DDX52 | ||
| Q9Y2T7 | Y-box-binding protein 2 | ||
| Q9Y2U8 | Inner nuclear membrane protein Man1 | ||
| Q9Y2V7 | Conserved oligomeric Golgi complex subunit 6 | ||
| Q9Y2W1 | Thyroid hormone receptor-associated protein 3 | ||
| Q9Y2W2 | WW domain-binding protein 11 | ||
| Q9Y2X0 | Mediator of RNA polymerase II transcription subunit 16 | ||
| Q9Y2X3 | Nucleolar protein 58 | ||
| Q9Y2X7 | ARF GTPase-activating protein GIT1 | ||
| Q9Y2X9 | Zinc finger protein 281 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 977580 | Lipid-saccharide intermediates in glycoprotein biosynthesis. III. Comparison of oligosaccharide-lipids formed by slices from several tissues. | Spiro MJ | 1976 Oct 25 |
|
| 977579 | Lipid-saccharide intermediates in glycoprotein biosynthesis. II. Studies on the structure of an oligosaccharide-lipid from thyroid. | Spiro RG | 1976 Oct 25 |
|
| 992027 | Characterization of a mannose‐containing glycoasparagine isolated from urine of a patient with aspartylglycosylaminuria (AGU) | Akasaki M | 1976 Oct 15 |
|
| 795426 | Glycosylation in vitro of an asparagine sequon catalysed by preparations of yeast cell membranes | Khalkhali Z | 1976 Oct 15 |
|
| 972144 | Structure of the accumulating oligosaccharide in fucosidosis. | Tsay GC | 1976 Oct 10 |
|
| 823160 | Identification of an isolated protein essential for peptidoglycan synthesis as the N-acetylglucosaminyltransferase. | Taku A | 1976 Oct 10 |
|
| 985526 | The control of glycoprotein synthesis: N-acetylglucosamine linkage to a mannose residue as a signal for the attachment of L-fucose to the asparagine-linked N-acetylglucosamine residue of glycopeptide from alpha1-acid glycoprotein | Wilson JR | 1976 Oct 04 |
|
| 974903 | The effects of glucosamine derivatives on the growth of cultivable Treponema | Thomas JJ | 1976 Oct 01 |
|
| 789385 | Cell surface saccharides ofTrypanosoma lewisi.: II lectin-mediated agglutination and fine-structure cytochemical detection of lectin-binding sites | Dwyer DM | 1976 Oct 01 |
|
| 984850 | Rat prothrombin: Purification, characterization, and activation | Grant GA | 1976 Oct |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. |
|
Nat Commun | 2024 Sep 3 | 39227587 |
| A protein O-GlcNAc glycosyltransferase regulates the antioxidative response in Yersinia pestis. |
|
Nat Commun | 2024 Aug 16 | 39152136 |
| Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis. |
|
Nat Commun | 2017 Dec 5 | 29208956 |
| Epithelial Mesenchymal Transition Induces Aberrant Glycosylation through Hexosamine Biosynthetic Pathway Activation. |
|
J Biol Chem | 2016 Jun 17 | 27129262 |
| The making of a sweet modification: structure and function of O-GlcNAc transferase. |
|
J Biol Chem | 2014 Dec 12 | 25336649 |
