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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
-
- 9
- 3780
- 3968
- 4708
- 25653
- 28493
- 29021
- 29527
- 29549
- 31775
- 32028
- 32903
- 33539
- 36048
- 36270
- 37035
- 37525
- 37675
- 37677
- 37678
- 39452
- 39454
- 39456
- 39609
- 39611
- 39613
- 39614
- 40149
- 40150
- 40151
- 40355
- 40591
- 40600
- 42059
- 42207
- 42220
- 43184
- 43893
- 43925
- 43926
- 43931
- 43932
- 43941
- 44395
- 44396
- 44397
- 44549
- 46453
- 47268
- 47468
- 47537
- 47603
- 47796
- 48630
- 48812
- 48813
- 49006
- 49732
- 50589
- 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-p-Nitrophenyl |
G00055MO
|
[beta]-1-p-Nitrophenyl | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B4GALT3 | UDP-Gal |
G49108TO
|
p-Nitrophenyl-[beta] |
G00055MO
|
p-Nitrophenyl-[beta] | |
| B4GALT5 | UDP-Gal |
G49108TO
|
G00055MO
|
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| A0A8I6A122 | TATA box-binding protein-like 1 | ||
| A0A8I6AMY7 | EMSY transcriptional repressor, BRCA2 interacting | ||
| A0AV96 | RNA-binding protein 47 | ||
| A0AVK6 | Transcription factor E2F8 | ||
| A0AVT1 | Ubiquitin-like modifier-activating enzyme 6 | ||
| A0FGR8 | Extended synaptotagmin-2 | ||
| A0MZ66 | Shootin-1 | ||
| A0PJY2 | Fez family zinc finger protein 1 | ||
| A1A6K6 | Nuclear speckle RNA-binding protein A | ||
| A1L0T0 | 2-hydroxyacyl-CoA lyase 2 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Sus scrofa |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Mus musculus |
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Homo sapiens |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 2169467 | Effect of inhibitors on conformational changes in hen lysozyme around thermal transition point in solution and solid state | BERNARD M | 1990 Jul |
|
| 1697149 | Alternate gram staining technique using a fluorescent lectin | Sizemore RK | 1990 Jul |
|
| 2365746 | Rapid endocytosis and recycling of wheat germ agglutinin binding sites on CHO cells: Evidence for two compartments in a nondegradative pathway | Raub TJ | 1990 Jul |
|
| 2132182 | Kinetic behaviour of liver glucokinase in diabetes. III. Possible role of insulinopenia | Zähner D | 1990 Jul |
|
| 2221354 | Colorimetric determination of N-acetylhexosamine-terminating O-glycosidically linked saccharides in mucins and glycoproteins | Bhavanandan VP | 1990 Jul |
|
| 2337595 | Observation of a kinetic slow transition in monomeric glucokinase | Neet KE | 1990 Jan 23 |
|
| 2295087 | Reconstitution of biochemically altered nuclear pores: Transport can be eliminated and restored | Finlay DR | 1990 Jan 12 |
|
| 2190615 | Cloning and characterization of the N-acetylglucosamine operon of Escherichia coli | Peri KG | 1990 Jan 01 |
|
| 2286534 | Histochemical detection of sugar residues in the chick embryo mesonephros with lectin-horseradish peroxidase conjugates | Gheri G | 1990 Jan |
|
| 2125904 | Characterization of a galactosyltransferase in purified bovine rod outer segments | Matuk Y | 1990 Jan |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
