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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R | |
| B3GALT1 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-thio-p-Nitrophenyl |
G00055MO
|
[beta]-1-thio-p-Nitrophenyl | |
| B4GALNT3 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B3GALNT2 | UDP-GalNAc |
G49108TO
|
[beta]-Bz |
G36387CV
|
[beta]-Bz |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9NUW8 | Tyrosyl-DNA phosphodiesterase 1 | ||
| Q9NV06 | DDB1- and CUL4-associated factor 13 | ||
| Q9NV66 | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 | ||
| Q9NVA2 | Septin-11 | ||
| Q9NVE4 | Coiled-coil domain-containing protein 87 | ||
| Q9NVH1 | DnaJ homolog subfamily C member 11 | ||
| Q9NVH2 | Integrator complex subunit 7 | ||
| Q9P0M2 | A-kinase anchor protein 7 isoform gamma | ||
| Q9NVI1 | Fanconi anemia group I protein | ||
| Q9NVI7 | ATPase family AAA domain-containing protein 3A |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 37075217 | Chitin oligomers promote lymphoid innate and adaptive immune cell activation | Maia A | 2023 Apr 19 |
|
| 37044090 | Germline-targeting HIV-1 Env vaccination induces VRC01-class antibodies with rare insertions | Caniels TG | 2023 Apr 18 |
|
| 37071215 | Recombinant production, characterization and industrial application testing of a novel acidic exo/endo-chitinase from Rasamsonia emersonii | Dwyer K | 2023 Apr 18 |
|
| 36862518 | Site of vulnerability on SARS-CoV-2 spike induces broadly protective antibody against antigenically distinct Omicron subvariants | Changrob S | 2023 Apr 17 |
|
| 37069158 | Inactivated vaccine-elicited potent antibodies can broadly neutralize SARS-CoV-2 circulating variants | Liu Y | 2023 Apr 17 |
|
| 37058110 | Hedgehog Signaling Regulates Treg to Th17 Conversion Through Metabolic Rewiring in Breast Cancer | Hinshaw DC | 2023 Apr 14 |
|
| 37042462 | A glycan epitope correlates with tau in serum and predicts progression to Alzheimer's disease in combination with APOE4 allele status | Zhou RZ | 2023 Apr 12 |
|
| 37041231 | Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants | Shitaoka K | 2023 Apr 11 |
|
| 37037474 | Low glucose induced Alzheimer's disease‐like biochemical changes in human induced pluripotent stem cell‐derived neurons is due to dysregulated O‐GlcNAcylation | Huang CW | 2023 Apr 10 |
|
| 37031439 | Cognitive dysfunction and increased phosphorylated tau are associated with reduced <scp>O‐GlcNAc</scp> signaling in an aging mouse model of metabolic syndrome | Gupta S | 2023 Apr 09 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
