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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
- 9 3780 3968 4708 25653 28493 29021 29527 29549 31775 32028 32903 33539 36048 36270 37035 37525 37675 37677 37678 39452 39454 39456 39609 39611 39613 39614 40149 40150 40151 40355 40591 40600 42059 42207 42220 43184 43893 43925 43926 43931 43932 43941 44395 44396 44397 44549 46453 47268 47468 47537 47603 47796 48630 48812 48813 49006 49732 50589 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Streptococcus pneumoniae | |
| Mus musculus (house mouse) | |
| Saccharomyces cerevisiae (brewer's yeast) | |
| Sus scrofa (pig) | |
| Rattus norvegicus (Norway rat) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R | |
| B4GALT4 | UDP-Gal |
G49108TO
|
G00055MO
|
|||
| B3GALT1 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALNT4 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R | |
| B4GALNT3 | UDP-GalNAc |
G49108TO
|
R |
G00057MO
|
R |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O70511 | Ankyrin-3 | ||
| O70546 | Lysine-specific demethylase 6A | ||
| O70551 | SRSF protein kinase 1 | ||
| O70585 | Dystrobrevin beta | ||
| O70591 | Prefoldin subunit 2 | ||
| O75027 | Iron-sulfur clusters transporter ABCB7, mitochondrial | ||
| P08F94 | Fibrocystin | ||
| O75030 | Microphthalmia-associated transcription factor | ||
| O75037 | Kinesin-like protein KIF21B | ||
| O75038 | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Sus scrofa |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Mus musculus |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36959261 | Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits | Zhang J | 2023 Mar 23 |
|
| 36952000 | Cross-β helical filaments of Tau and TMEM106B in gray and white matter of multiple system tauopathy with presenile dementia | Hoq MR | 2023 Mar 23 |
|
| 36947859 | A bispecific inhibitor of complement and coagulation blocks activation in complementopathy models via a novel mechanism | Andersen JF | 2023 Mar 22 |
|
| 36949205 | Ultrafast structural changes direct the first molecular events of vision | Gruhl T | 2023 Mar 22 |
|
| 36943885 | Cryo-EM analyses of KIT and oncogenic mutants reveal structural oncogenic plasticity and a target for therapeutic intervention | Krimmer SG | 2023 Mar 21 |
|
| 36852467 | Chemoproteomic and Transcriptomic Analysis Reveals that O-GlcNAc Regulates Mouse Embryonic Stem Cell Fate through the Pluripotency Network | Hao Y | 2023 Mar 20 |
|
| 36934283 | Effect of PCL nanofiber mats coated with chitosan microcapsules containing cinnamon essential oil for wound healing | Osanloo M | 2023 Mar 18 |
|
| 36936781 | Transient receptor potential canonical type 6 (TRPC6) O-GlcNAcylation at Threonine-221 plays potent role in channel regulation | Mishra S | 2023 Mar 17 |
|
| 36993551 | A general computational design strategy for stabilizing viral class I fusion proteins | Gonzalez KJ | 2023 Mar 17 |
|
| 36930708 | Structural insights into the assembly of gp130 family cytokine signaling complexes | Zhou Y | 2023 Mar 17 |
|
