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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| F7BJB9 | MORC family CW-type zinc finger protein 3 | ||
| F7C957 | PDZ and LIM domain 2 (Fragment) | ||
| F7D291 | MTSS I-BAR domain containing 2 (Fragment) | ||
| F8VPZ9 | BRD4-interacting chromatin-remodeling complex-associated protein | ||
| F8VQ29 | IQ motif containing GTPase activating protein 3 | ||
| F8VQK3 | guanylate cyclase | ||
| F8VQM5 | Sucrase isomaltase | ||
| F8WGN6 | Kinesin family member 21A | ||
| F8WIT2 | Annexin | ||
| G3UYW7 | Yes-associated protein 1 (Fragment) |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O96 | Escherichia coli |
| E.coli O98 | Escherichia coli |
| Events associated with phagocytolytic activity of PMN cells | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Sus scrofa |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35230102 | Thermal Proteome Profiling Reveals the O-GlcNAc-Dependent Meltome | King DT | 2022 Mar 01 |
|
| 35232398 | Structural insights into the non-inhibitory mechanism of the anti-EGFR EgB4 nanobody | Zeronian MR | 2022 Mar 01 |
|
| 34958847 | Structure of recombinantly expressed cockroach Lili-Mip protein in glycosylated and deglycosylated forms | KanagaVijayan D | 2022 Mar |
|
| 35120929 | Comparison of glycoside hydrolase family 3 β-xylosidases from basidiomycetes and ascomycetes reveals evolutionarily distinct xylan degradation systems | Kojima K | 2022 Mar |
|
| 35183508 | Nutrient-responsive O-GlcNAcylation dynamically modulates the secretion of glycan-binding protein galectin 3 | Mathew MP | 2022 Mar |
|
| 35427837 | The beneficial effect of global O-GlcNAcylation on odontogenic differentiation of human dental pulp cells via mTORC1 pathway | Hu Y | 2022 Jun |
|
| 35289036 | Endo-M Mediated Chemoenzymatic Approach Enables Reversible Glycopeptide Labeling for O-GlcNAcylation Analysis | Chen Y | 2022 Jun 7 |
|
| 35665438 | N -Acetylglucosamine Promotes Tomato Plant Growth by Shaping the Community Structure and Metabolism of the Rhizosphere Microbiome | Sun J | 2022 Jun 29 |
|
| 35768499 | A broadly neutralizing antibody against SARS-CoV-2 Omicron variant infection exhibiting a novel trimer dimer conformation in spike protein binding | Wang Y | 2022 Jun 29 |
|
| 35732171 | Cryo-EM structures of SARS-CoV-2 Omicron BA.2 spike | Stalls V | 2022 Jun 28 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
