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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O00754 | Lysosomal alpha-mannosidase | ||
| O00763 | Acetyl-CoA carboxylase 2 | ||
| O04023 | Protein SRC2 homolog | ||
| O08537 | Estrogen receptor beta | ||
| O08550 | Histone-lysine N-methyltransferase 2B | ||
| O08553 | Dihydropyrimidinase-related protein 2 | ||
| O08579 | Emerin | ||
| O08599 | Syntaxin-binding protein 1 | ||
| O08696 | Forkhead box protein M1 | ||
| O08709 | Peroxiredoxin-6 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O96 | Escherichia coli |
| E.coli O98 | Escherichia coli |
| Events associated with phagocytolytic activity of PMN cells | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Sus scrofa |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36726762 | A core epitope targeting antibody of SARS-CoV-2 | Zhao S | 2022 Oct 26 |
|
| 36288283 | A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus | Li H | 2022 Oct 26 |
|
| 36156831 | Hybrid in vitro/in silico analysis of low‐affinity protein–protein interactions that regulate signal transduction by <scp>Sema6D</scp> | Tanaka T | 2022 Oct 26 |
|
| 36200915 | Bacterial Outer Membrane Polysaccharide Export (OPX) Proteins Occupy Three Structural Classes with Selective β-Barrel Porin Requirements for Polymer Secretion | Saïdi F | 2022 Oct 26 |
|
| 36274064 | Cryomicroscopy reveals the structural basis for a flexible hinge motion in the immunoglobulin M pentamer | Chen Q | 2022 Oct 23 |
|
| 36272978 | Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560 | Guo X | 2022 Oct 22 |
|
| 36271110 | Prediction of decreased estimated glomerular filtration rate using liver fibrosis markers: a renal biopsy-based study | Mima A | 2022 Oct 21 |
|
| 36264808 | Structure of the hepatitis C virus E1E2 glycoprotein complex | Torrents de la Peña A | 2022 Oct 21 |
|
| 36266488 | Fructose-1,6-bisphosphatase 1 functions as a protein phosphatase to dephosphorylate histone H3 and suppresses PPARα-regulated gene transcription and tumour growth | Wang Z | 2022 Oct 20 |
|
| 36080360 | Crystal structure of human CD47 in complex with engineered SIRPa.D1(N80A) | Yu J | 2022 Oct 19 |
|
