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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y5H0 | Protocadherin gamma-A3 | ||
| Q9Y5J1 | U3 small nucleolar RNA-associated protein 18 homolog | ||
| Q9Y5K1 | Meiotic recombination protein SPO11 | ||
| Q9Y5K6 | CD2-associated protein | ||
| Q9Y5L3 | Ectonucleoside triphosphate diphosphohydrolase 2 | ||
| Q9Y5M8 | Signal recognition particle receptor subunit beta | ||
| Q9Y5S2 | Serine/threonine-protein kinase MRCK beta | ||
| Q9Y5U2 | U5 small nuclear ribonucleoprotein TSSC4 | ||
| Q9Y5V3 | Melanoma-associated antigen D1 | ||
| Q9Y5W8 | Sorting nexin-13 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O96 | Escherichia coli |
| E.coli O98 | Escherichia coli |
| Events associated with phagocytolytic activity of PMN cells | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Sus scrofa |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35138101 | Spatiotemporal Activation of Protein O-GlcNAcylation in Living Cells | He J | 2022 Feb 09 |
|
| 35140400 | Glioblastoma mutations alter EGFR dimer structure to prevent ligand bias | Hu C | 2022 Feb 09 |
|
| 35140402 | Mechanisms of inhibition and activation of extrasynaptic αβ GABAA receptors | Kasaragod VB | 2022 Feb 09 |
|
| 35132862 | Simultaneously Identifying and Distinguishing Glycoproteins with O-GlcNAc and O-GalNAc (the Tn Antigen) in Human Cancer Cells | Xu S | 2022 Feb 08 |
|
| 34990590 | Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization | Weber T | 2022 Feb 08 |
|
| 35114110 | Rapid identification of neutralizing antibodies against SARS-CoV-2 variants by mRNA display | Tanaka S | 2022 Feb 08 |
|
| 35136084 | Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer | Yang Z | 2022 Feb 08 |
|
| 35136060 | Differential activation mechanisms of lipid GPCRs by lysophosphatidic acid and sphingosine 1-phosphate | Liu S | 2022 Feb 08 |
|
| 35131851 | Universal stabilization of the influenza hemagglutinin by structure-based redesign of the pH switch regions | Milder FJ | 2022 Feb 07 |
|
| 34999257 | Crystal structure and substrate recognition mechanism of the prolyl endoprotease PEP from Aspergillus niger | Miyazono K | 2022 Feb 05 |
|
