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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9NYQ7 | Cadherin EGF LAG seven-pass G-type receptor 3 | ||
| Q9NYU2 | UDP-glucose:glycoprotein glucosyltransferase 1 | ||
| Q9NYV4 | Cyclin-dependent kinase 12 | ||
| Q9NYY1 | Interleukin-20 | ||
| Q9NZ08 | Endoplasmic reticulum aminopeptidase 1 | ||
| Q9NZ09 | Ubiquitin-associated protein 1 | ||
| Q9NZ52 | ADP-ribosylation factor-binding protein GGA3 | ||
| Q9NZ53 | Podocalyxin-like protein 2 | ||
| Q9NZH4 | Putative pituitary tumor-transforming gene 3 protein | ||
| Q9NZH7 | Interleukin-36 beta |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Rattus norvegicus |
| Initial triggering of complement | Gallus gallus |
| Initial triggering of complement | Homo sapiens |
| Initial triggering of complement | Bos taurus |
| Initial triggering of complement | Rattus norvegicus |
| Initial triggering of complement | Canis familiaris |
| Initial triggering of complement | Xenopus tropicalis |
| Initial triggering of complement | Sus scrofa |
| Initial triggering of complement | Mus musculus |
| Lectin pathway of complement activation | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36232558 | O-GlcNAcylation in Renal (Patho)Physiology | Silva-Aguiar RP | 2022 Sep 24 |
|
| 36083143 | The endoglycosidase activity of Dispersin B is mediated through electrostatic interactions with cationic poly‐β‐(1→6)‐N‐acetylglucosamine | Breslawec AP | 2022 Sep 24 |
|
| 36153317 | Structure of the malaria vaccine candidate Pfs48/45 and its recognition by transmission blocking antibodies | Ko K | 2022 Sep 24 |
|
| 36149580 | RNA binding motif protein 3 (RBM3) promotes protein kinase B (AKT) activation to enhance glucose metabolism and reduce apoptosis in skeletal muscle of mice under acute cold exposure | Liu Y | 2022 Sep 23 |
|
| 36151080 | The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases | Luang S | 2022 Sep 23 |
|
| 36211961 | Engineering recombinantly expressed lectin-based antiviral agents | Maier I | 2022 Sep 23 |
|
| 36138032 | Engineering SARS-CoV-2 specific cocktail antibodies into a bispecific format improves neutralizing potency and breadth | Ku Z | 2022 Sep 22 |
|
| 35776905 | Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange | Anderson JR | 2022 Sep 22 |
|
| 36131021 | Plant receptor-like protein activation by a microbial glycoside hydrolase | Sun Y | 2022 Sep 21 |
|
| 36131020 | Structural basis for directional chitin biosynthesis | Chen W | 2022 Sep 21 |
|
