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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9D6K8 | FUN14 domain-containing protein 2 | ||
| Q9D6R2 | Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial | ||
| Q9D6U8 | Protein FAM162A | ||
| Q9D6W7 | CD164 sialomucin-like 2 protein | ||
| Q9D6Z1 | Nucleolar protein 56 | ||
| Q9D727 | Peroxisomal biogenesis factor 39 | ||
| Q9D7E4 | UPF0449 protein C19orf25 homolog | ||
| Q9D7N9 | Adipocyte plasma membrane-associated protein | ||
| Q9D7V1 | SH2 domain-containing protein 4A | ||
| Q9D809 | RIKEN cDNA 2200002D01 gene |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Lectin pathway of complement activation | Rattus norvegicus |
| Lectin pathway of complement activation | Homo sapiens |
| Lectin pathway of complement activation | Canis familiaris |
| Lectin pathway of complement activation | Sus scrofa |
| Lectin pathway of complement activation | Bos taurus |
| Lectin pathway of complement activation | Mus musculus |
| Lectin pathway of complement activation | Gallus gallus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 37667314 | The anti-allergic potential of stingless bee honey from different botanical sources via modulation of mast cell degranulation | Yong PYA | 2023 Sep 04 |
|
| 37442287 | Swainsonine inhibits autophagic degradation and causes cytotoxicity by reducing CTSD O-GlcNAcylation | Wang S | 2023 Sep 01 |
|
| 37656766 | A structural classification of the variant surface glycoproteins of the African trypanosome | Đaković S | 2023 Sep 01 |
|
| 37230627 | N-acetyl-d-glucosamine-based oligosaccharides from chitin: Enzymatic production, characterization and biological activities | Liu Y | 2023 Sep 01 |
|
| 37451145 | Discovery of a novel OGT inhibitor through high-throughput screening based on Homogeneous Time-Resolved Fluorescence (HTRF) | Wu X | 2023 Oct |
|
| 37689115 | O-GlcNAc transferase promotes glioblastoma by modulating genes responsible for cell survival, invasion, and inflammation | Sheikh MA | 2023 Oct |
|
| 37907462 | Cryo-EM structure of human O-GlcNAcylation enzyme pair OGT-OGA complex | Lu P | 2023 Oct 31 |
|
| 37903183 | Effect of vitrification on protein O-GlcNAcylation in mouse metaphase II oocytes | Zhang K | 2023 Oct 30 |
|
| 37903907 | The molecular basis of drug selectivity for α5 subunit-containing GABAA receptors | Kasaragod VB | 2023 Oct 30 |
|
| 37804831 | Vertebrate-class-specific binding modes of the alphavirus receptor MXRA8 | Zimmerman O | 2023 Oct 26 |
|
