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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
-
- 9
- 3780
- 3968
- 4708
- 25653
- 28493
- 29021
- 29527
- 29549
- 31775
- 32028
- 32903
- 33539
- 36048
- 36270
- 37035
- 37525
- 37675
- 37677
- 37678
- 39452
- 39454
- 39456
- 39609
- 39611
- 39613
- 39614
- 40149
- 40150
- 40151
- 40355
- 40591
- 40600
- 42059
- 42207
- 42220
- 43184
- 43893
- 43925
- 43926
- 43931
- 43932
- 43941
- 44395
- 44396
- 44397
- 44549
- 46453
- 47268
- 47468
- 47537
- 47603
- 47796
- 48630
- 48812
- 48813
- 49006
- 49732
- 50589
- 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| A0A1B0GSG7 | Kinesin-like protein | ||
| A0A1B0GUY1 | MARCO-like protein | ||
| A0A1B0GW35 | Exocyst complex component 1-like | ||
| A0A1B0GX95 | T cell receptor beta variable 7-4 | ||
| A0A1P8BET4 | Uncharacterized protein | ||
| A0A1Q1NIF8 | non-specific serine/threonine protein kinase | ||
| A0A286YF58 | Transmembrane protein 271 | ||
| A0A4P7NM30 | RNA polymerase II degradation factor 1 | ||
| A0A571BE33 | von Willebrand factor A domain containing 3B | ||
| A0A5A6 | T cell receptor beta variable 11-3 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O116 | Escherichia coli |
| E.coli O118 | Escherichia coli |
| E.coli O12 | Escherichia coli |
| E.coli O126 | Escherichia coli |
| E.coli O126H27 | Escherichia coli |
| E.coli O129 | Escherichia coli |
| E.coli O13 | Escherichia coli |
| E.coli O132 | Escherichia coli |
| E.coli O135 | Escherichia coli |
| E.coli O136 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3729878 | Lectin Binding and the Carbohydrate Moieties Present on Newcastle Disease Virus Strains | McMillan BC | 1986 Apr |
|
| 3520245 | Growth of Mycoplasma mycoides subspecies mycoides on media containing various sugars and amino sugars: an ampoule microcalorimetric study | Miles RJ | 1986 |
|
| 3757884 | [Localization of lectin receptors on the surface of C1300 neuroblastoma cells] | Khomutovskiĭ OA | 1986 |
|
| 3020930 | Mechanism of thymineless death | Goulian M | 1986 |
|
| 3717895 | Diurnal Variations and within the Feed in Lactose and Oligosaccharides of Human Milk | Viverge D | 1986 |
|
| 2940622 | Hepatic membrane receptors for glycoproteins | Steer CJ | 1986 |
|
| 3161730 | Intralysosomal formation and metabolic fate of N-acetylglucosamine 6-sulfate from keratan sulfate | Fuchs W | 1985 Sep 16 |
|
| 3928627 | Occurrence of N-acetylglucosamine 6-phosphate in complex carbohydrates. Characterization of a phosphorylated sialyl oligosaccharide from bovine colostrum. | Parkkinen J | 1985 Sep 15 |
|
| 4030095 | Identification of chitin as a structural component of Giardia cysts | Ward HD | 1985 Sep |
|
| 2995421 | Wheat germ agglutinin and concanavalin A inhibit the response of human fibroblasts to peptide growth factors by a post‐receptor mechanism | Kaplowitz PB | 1985 Sep |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
