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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y2R4 | Probable ATP-dependent RNA helicase DDX52 | ||
| Q9Y2T7 | Y-box-binding protein 2 | ||
| Q9Y2U8 | Inner nuclear membrane protein Man1 | ||
| Q9Y2V7 | Conserved oligomeric Golgi complex subunit 6 | ||
| Q9Y2W1 | Thyroid hormone receptor-associated protein 3 | ||
| Q9Y2W2 | WW domain-binding protein 11 | ||
| Q9Y2X0 | Mediator of RNA polymerase II transcription subunit 16 | ||
| Q9Y2X3 | Nucleolar protein 58 | ||
| Q9Y2X7 | ARF GTPase-activating protein GIT1 | ||
| Q9Y2X9 | Zinc finger protein 281 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O137 | Escherichia coli |
| E.coli O138 | Escherichia coli |
| E.coli O141 | Escherichia coli |
| E.coli O142 | Escherichia coli |
| E.coli O143 | Escherichia coli |
| E.coli O145 | Escherichia coli |
| E.coli O149 | Escherichia coli |
| E.coli O15 | Escherichia coli |
| E.coli O150 | Escherichia coli |
| E.coli O151 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35233549 | Immunization with synthetic SARS-CoV-2 S glycoprotein virus-like particles protects macaques from infection | Sulbaran G | 2022 Feb 15 |
|
| 35123652 | A Fc-enhanced NTD-binding non-neutralizing antibody delays virus spread and synergizes with a nAb to protect mice from lethal SARS-CoV-2 infection | Beaudoin-Bussières G | 2022 Feb 15 |
|
| 35169121 | Broad ultra-potent neutralization of SARS-CoV-2 variants by monoclonal antibodies specific to the tip of RBD | Ma H | 2022 Feb 15 |
|
| 35165458 | Structure of a human glycosylphosphatidylinositol (GPI) transamidase | Zhang H | 2022 Feb 14 |
|
| 35164752 | O-GlcNAc transferase couples MRE11 to transcriptionally active chromatin to suppress DNA damage | Gondane A | 2022 Feb 14 |
|
| 35138894 | Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation | Kissel T | 2022 Feb 11 |
|
| 35149682 | Structure of infective Getah virus at 2.8 Å resolution determined by cryo-electron microscopy | Wang A | 2022 Feb 11 |
|
| 35148176 | The pore conformation of lymphocyte perforin | Ivanova ME | 2022 Feb 11 |
|
| 35060840 | Etesevimab in combination with JS026 neutralizing SARS-CoV-2 and its variants | Wang F | 2022 Feb 10 |
|
| 35083852 | O-GlcNAcylation promotes fatty acid synthase activity under nutritional stress as a pro-survival mechanism in cancer cells | Wong YK | 2022 Feb 09 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
