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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y2R4 | Probable ATP-dependent RNA helicase DDX52 | ||
| Q9Y2T7 | Y-box-binding protein 2 | ||
| Q9Y2U8 | Inner nuclear membrane protein Man1 | ||
| Q9Y2V7 | Conserved oligomeric Golgi complex subunit 6 | ||
| Q9Y2W1 | Thyroid hormone receptor-associated protein 3 | ||
| Q9Y2W2 | WW domain-binding protein 11 | ||
| Q9Y2X0 | Mediator of RNA polymerase II transcription subunit 16 | ||
| Q9Y2X3 | Nucleolar protein 58 | ||
| Q9Y2X7 | ARF GTPase-activating protein GIT1 | ||
| Q9Y2X9 | Zinc finger protein 281 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O137 | Escherichia coli |
| E.coli O138 | Escherichia coli |
| E.coli O141 | Escherichia coli |
| E.coli O142 | Escherichia coli |
| E.coli O143 | Escherichia coli |
| E.coli O145 | Escherichia coli |
| E.coli O149 | Escherichia coli |
| E.coli O15 | Escherichia coli |
| E.coli O150 | Escherichia coli |
| E.coli O151 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35969743 | O-GlcNAcylation promotes cerebellum development and medulloblastoma oncogenesis via SHH signaling | Chen L | 2022 Aug 15 |
|
| 35871308 | Ultrasensitive assay of O‐GlcNAc transferase using capillary electrophoresis‐laser induced fluorescence | Liu J | 2022 Aug 15 |
|
| 35906001 | Molecular and Structural Basis of Receptor Binding and Signaling of a Fish Type I IFN with Three Disulfide Bonds | Chen J | 2022 Aug 15 |
|
| 35960796 | A naturally arising broad and potent CD4-binding site antibody with low somatic mutation | Barnes CO | 2022 Aug 12 |
|
| 35907402 | Cryo-EM structures of human fucosidase FucA1 reveal insight into substrate recognition and catalysis | Armstrong Z | 2022 Aug 10 |
|
| 36048150 | Native glycosylation and binding of the antidepressant paroxetine in a low-resolution crystal structure of human myeloperoxidase | Krawczyk L | 2022 Aug 09 |
|
| 35939690 | PTX3 structure determination using a hybrid cryoelectron microscopy and AlphaFold approach offers insights into ligand binding and complement activation | Noone DP | 2022 Aug 08 |
|
| 35939295 | Discovery of SPH3127: A Novel, Highly Potent, and Orally Active Direct Renin Inhibitor | Iijima D | 2022 Aug 08 |
|
| 35939698 | Structures of the mannose-6-phosphate pathway enzyme, GlcNAc-1-phosphotransferase | Gorelik A | 2022 Aug 08 |
|
| 35940204 | Hormone- and antibody-mediated activation of the thyrotropin receptor | Duan J | 2022 Aug 08 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
