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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9HBG7 | T-lymphocyte surface antigen Ly-9 | ||
| Q9HBK9 | Arsenite methyltransferase | ||
| Q9HBL0 | Tensin-1 | ||
| Q9HBM6 | Transcription initiation factor TFIID subunit 9B | ||
| Q9HC07 | Putative divalent cation/proton antiporter TMEM165 | ||
| Q9HC35 | Echinoderm microtubule-associated protein-like 4 | ||
| Q9HC36 | rRNA methyltransferase 3, mitochondrial | ||
| Q9HC58 | Sodium/potassium/calcium exchanger 3 | ||
| Q9HC78 | Zinc finger and BTB domain-containing protein 20 | ||
| Q9HC84 | Mucin-5B |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O173 | Escherichia coli |
| E.coli O174ab | Escherichia coli |
| E.coli O174ac | Escherichia coli |
| E.coli O177 | Escherichia coli |
| E.coli O181 | Escherichia coli |
| E.coli O182 | Escherichia coli |
| E.coli O187 | Escherichia coli |
| E.coli O18A | Escherichia coli |
| E.coli O18A1 | Escherichia coli |
| E.coli O18ac | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 39442557 | Molecular mechanism of IgE-mediated FcεRI activation | Chen M | 2024 Oct 23 |
|
| 38464151 | Protective effect and molecular mechanisms of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination | Clark JJ | 2024 Oct 23 |
|
| 39422475 | On the humanization of VHHs: Prospective case studies, experimental and computational characterization of structural determinants for functionality | Fernández-Quintero ML | 2024 Oct 18 |
|
| 39425013 | New perspectives on YTHDF2 O-GlcNAc modification in the pathogenesis of intervertebral disc degeneration | Lu L | 2024 Oct 18 |
|
| 39464000 | Initiation of ERAD by the bifunctional complex of Mnl1 mannosidase and protein disulfide isomerase | Zhao D | 2024 Oct 17 |
|
| 39413067 | The correlation between cellular O-GlcNAcylation and sensitivity to O-GlcNAc inhibitor in colorectal cancer cells | Wongprayoon P | 2024 Oct 16 |
|
| 39407062 | Modulation of Plet1 expression by N-Acetylglucosamine through the IL-17 A-MAPK pathway in an imiquimod-induced psoriasis mouse model | Selvakumar B | 2024 Oct 15 |
|
| 39405070 | O-GlcNAc participates in the meiosis of aging oocytes by mediating mitochondrial function | Li C | 2024 Oct 15 |
|
| 39416215 | A noncanonical glycoprotein H complex enhances cytomegalovirus entry | Norris MJ | 2024 Oct 13 |
|
| 39392890 | Structures of the Foamy virus fusion protein reveal an unexpected link with the F protein of paramyxo- and pneumoviruses | Fernández I | 2024 Oct 11 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
