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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GlycoNAVI
- G49108TO
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y5X3 | Sorting nexin-5 | ||
| Q9Y5X4 | Photoreceptor-specific nuclear receptor | ||
| Q9Y5Y2 | Cytosolic Fe-S cluster assembly factor NUBP2 | ||
| Q9Y5Z4 | Heme-binding protein 2 | ||
| Q9Y5Z7 | Host cell factor 2 | ||
| Q9Y608 | Leucine-rich repeat flightless-interacting protein 2 | ||
| Q9Y613 | FH1/FH2 domain-containing protein 1 | ||
| Q9Y616 | Interleukin-1 receptor-associated kinase 3 | ||
| Q9Y618 | Nuclear receptor corepressor 2 | ||
| Q9Y639 | Neuroplastin |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O28ab | Escherichia coli |
| E.coli O28ac | Escherichia coli |
| E.coli O29 | Escherichia coli |
| E.coli O3 | Escherichia coli |
| E.coli O30 | Escherichia coli |
| E.coli O32 | Escherichia coli |
| E.coli O35 | Escherichia coli |
| E.coli O36 | Escherichia coli |
| E.coli O37 | Escherichia coli |
| E.coli O38 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35579417 | Author response: Structure of the IL-27 quaternary receptor signaling complex | Caveney NA | 2022 May 17 |
|
| 35577790 | Ca2+-mediated higher-order assembly of heterodimers in amino acid transport system b0,+ biogenesis and cystinuria | Lee Y | 2022 May 16 |
|
| 35544562 | A bioactive phlebovirus-like envelope protein in a hookworm endogenous virus | Merchant M | 2022 May 13 |
|
| 35562392 | Shrimp thrombospondin (TSP): presence of O-β1,4 N-acetylglucosamine polymers and its function in TSP chain association in egg extracellular matrix | Magerd S | 2022 May 13 |
|
| 35549549 | Structural insights of a highly potent pan-neutralizing SARS-CoV-2 human monoclonal antibody | Torres JL | 2022 May 12 |
|
| 35551457 | Molecular insights into biogenesis of glycosylphosphatidylinositol anchor proteins | Xu Y | 2022 May 12 |
|
| 35507649 | Structural mapping of antibody landscapes to human betacoronavirus spike proteins | Bangaru S | 2022 May 06 |
|
| 35507661 | Characterization of a vaccine-elicited human antibody with sequence homology to VRC01-class antibodies that binds the C1C2 gp120 domain | Gray MD | 2022 May 06 |
|
| 35513511 | Cell-type-specific labeling and profiling of glycans in living mice | Fan X | 2022 May 05 |
|
| 35513753 | The interaction of O-GlcNAc-modified NLRX1 and IKK-α modulates IL-1β expression in M1 macrophages | Chen L | 2022 May 05 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. |
|
Nat Commun | 2024 Sep 3 | 39227587 |
| A protein O-GlcNAc glycosyltransferase regulates the antioxidative response in Yersinia pestis. |
|
Nat Commun | 2024 Aug 16 | 39152136 |
| Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis. |
|
Nat Commun | 2017 Dec 5 | 29208956 |
| Epithelial Mesenchymal Transition Induces Aberrant Glycosylation through Hexosamine Biosynthetic Pathway Activation. |
|
J Biol Chem | 2016 Jun 17 | 27129262 |
| The making of a sweet modification: structure and function of O-GlcNAc transferase. |
|
J Biol Chem | 2014 Dec 12 | 25336649 |
