GlyCosmos Portal

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3D Structures

GLYCAM: DGlcpNAcb1-OH

GlycoShape

G49108TO

Displaying 1 entry
Archetype	α	β
G14843DJ	G68544GH	G49108TO

Organisms

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Organisms	Evidence
Streptococcus pneumoniae	GlyTouCan(bcsdb)
Mus musculus (house mouse)	GlyConnectStructure GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB) GlyGen(UniCarbKB) GlycoEpitope
Saccharomyces cerevisiae (brewer's yeast)	GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB)
Sus scrofa (pig)	GlyGen(OGlcNAcAtlas)
Rattus norvegicus (Norway rat)	GlyConnectStructure GlyGen(OGlcNAcAtlas) GlyGen(OGlcNAcDB) GlyGen(UniCarbKB) GlycoEpitope

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus [inference]

Rattus norvegicus (Norway rat)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Laurasiatheria [inference]

Artiodactyla (even-toed ungulates & whales) [inference]

Suina [inference]

Suidae (pigs) [inference]

Sus [inference]

Sus scrofa (pig)

Protostomia [inference]

Ecdysozoa [inference]

Panarthropoda [inference]

Arthropoda (arthropods) [inference]

Mandibulata [inference]

Pancrustacea [inference]

Hexapoda (hexapods) [inference]

Insecta (insects) [inference]

Dicondylia [inference]

Pterygota (winged insects) [inference]

Neoptera [inference]

Endopterygota [inference]

Diptera (flies) [inference]

Brachycera [inference]

Muscomorpha [inference]

Eremoneura [inference]

Cyclorrhapha [inference]

Schizophora [inference]

Acalyptratae [inference]

Ephydroidea [inference]

Drosophilidae (pomace flies) [inference]

Drosophilinae [inference]

Drosophilini [inference]

Drosophila (fruit flies) [inference]

Sophophora [inference]

melanogaster group [inference]

melanogaster subgroup [inference]

Drosophila melanogaster (fruit fly)

Fungi [inference]

Dikarya [inference]

Ascomycota (ascomycetes) [inference]

saccharomyceta [inference]

Saccharomycotina (true yeasts) [inference]

Saccharomycetes [inference]

Saccharomycetales [inference]

Saccharomycetaceae [inference]

Saccharomyces [inference]

Saccharomyces cerevisiae (brewer's yeast)

Bacteria (eubacteria) [inference]

Terrabacteria group [inference]

Bacillota [inference]

Bacilli [inference]

Lactobacillales [inference]

Streptococcaceae [inference]

Streptococcus [inference]

Streptococcus pneumoniae

Viruses [inference]

Riboviria [inference]

Orthornavirae [inference]

Negarnaviricota [inference]

Polyploviricotina [inference]

Insthoviricetes [inference]

Articulavirales [inference]

Orthomyxoviridae [inference]

unclassified Orthomyxoviridae [inference]

unidentified influenza virus

GlycoGene Database (GGDB)

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G49108TO	[beta]-S-pNP	G00055MO	[beta]-S-pNP	9435216
B4GALT1	UDP-Gal	G49108TO	R	G00055MO	R	3014508
B4GALT2	UDP-Gal	G49108TO	Benzyl-[beta]	G00055MO	Benzyl-[beta]	9405390
B3GALT2	UDP-Gal	G49108TO	Lemieux	G00056MO	Lemieux	9417100
B3GALT5	UDP-Gal	G49108TO	R	G00056MO	R	10212226

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G49108TO	[beta]-S-pNP	G00055MO	[beta]-S-pNP	9435216
B4GALT4	UDP-Gal	G49108TO	[beta]-1-thio-p-Nitrophenyl	G00055MO	[beta]-1-thio-p-Nitrophenyl	9792633
B4GALT3	UDP-Gal	G49108TO	4-Me-lumbelyl-[beta]	G00055MO	4-Me-lumbelyl-[beta]	9405390
B4GALT4	UDP-Gal	G49108TO	[beta]-1-4-methyl-umbelliferyl	G00055MO	[beta]-1-4-methyl-umbelliferyl	9792633
B4GALT1	UDP-Gal	G49108TO		G00055MO		10580128

Displaying entries **1 - 5** of 24 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
ST6GAL1	CMP-Neu5Ac	G49108TO	para-nitrophenol	12603328
ST6GAL2	CMP-Neu5Ac	G49108TO	para-nitrophenol	12603328
ST6GALNAC2	CMP-Neu5Ac	G49108TO	benzyl	11062056
CHST7	PAPS	G49108TO	-O-CH3	10781596
CHST3	PAPS	G49108TO	-O-CH3	10781596

KEGG BRITE Database

KEGG ID

Enzyme

2.4.1.255

Core Protein

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UniProt ID	Protein Name	Reference	Source
O75367	Core histone macro-H2A.1	29351928 32119511 33214551 34019948 34725712 35083852 38665916	GlyGen The O-GlcNAc Database
O75369	Filamin-B	23301498 26853435 29351928 30379171 30397120 30444036 32119511 33214551 34019948 34229054 34725712 35008409 35083852 35254053 38665916	GlyGen The O-GlcNAc Database
O75376	Nuclear receptor corepressor 1	20068230 23301498 26374642 27655845 28657654 29237092 29351928 30059200 30379171 30620550 31492838 31637018 32119511 32574038 33214551 34019948 34846842 35132862 35138101 35254053 35289036 37340703 38665916 39302247 39531497 39534244	GlyGen The O-GlcNAc Database GlyConnect
O75385	Serine/threonine-protein kinase ULK1	28903979 30517873 35931119	GlyGen The O-GlcNAc Database
O75391	Sperm-associated antigen 7	23301498 30620550 31373491 34019948 35132862 38665916	GlyGen The O-GlcNAc Database
O75394	Large ribosomal subunit protein bL33m	30379171	GlyGen The O-GlcNAc Database
O75396	Vesicle-trafficking protein SEC22b	32870666 33214551 33465208 34019948 34725712 35083852 37217939 38665916	GlyGen The O-GlcNAc Database
O75400	Pre-mRNA-processing factor 40 homolog A	22121020 23301498 27655845 28510447 29351928 30397120 32119511 32522876 33214551 33465208 34019948 34229054 34725712 37217939 38665916	GlyGen The O-GlcNAc Database
O75417	DNA polymerase theta	29208956 30379171 37217939	GlyGen The O-GlcNAc Database
O75420	GRB10-interacting GYF protein 1	23301498 28657654 31492838	GlyGen The O-GlcNAc Database

GlycoEpitope

Epitope ID: EP0004

Pathway

Displaying entries **81 - 90** of **127** in total

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Pathway Name	Organism
E.coli O4-H5	Escherichia coli
E.coli O4-K52	Escherichia coli
E.coli O40	Escherichia coli
E.coli O41	Escherichia coli
E.coli O42	Escherichia coli
E.coli O45rel	Escherichia coli
E.coli O48	Escherichia coli
E.coli O53	Escherichia coli
E.coli O55	Escherichia coli
E.coli O56	Escherichia coli

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
LIN
1:1d(2+1)2n

WURCS

WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/

Literature

Displaying entries **391 - 400** of **10696** in total

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PubMed ID	Title	First Author	Publication Date	Source
37858678	O-GlcNAc has crosstalk with ADP-ribosylation via PARG	Li J	2023 Nov	GlyGen PubChem
37683586	Icaritin inhibits endometrial carcinoma cells by suppressing O-GlcNAcylation of FOXC1	Wang Y	2023 Nov	GlyGen PubChem
37945829	O-GlcNAcylation determines the translational regulation and phase separation of YTHDF proteins	Chen Y	2023 Nov	GlyGen PubChem
37639774	H3K4me3 remodeling induced acquired resistance through O-GlcNAc transferase	Ravindran Menon D	2023 Nov	GlyGen PubChem
37855638	Discovery of Nanosota-2, -3, and -4 as super potent and broad-spectrum therapeutic nanobody candidates against COVID-19	Ye G	2023 Nov 30	PubChem
38007588	O-GlcNAcylation is essential for therapeutic mitochondrial transplantation	Park JH	2023 Nov 25	GlyGen PubChem
37993467	Orthosteric and allosteric modulation of human HCAR2 signaling complex	Mao C	2023 Nov 22	PubChem
37972591	Structural basis for human Cav1.2 inhibition by multiple drugs and the neurotoxin calciseptine	Gao S	2023 Nov 22	PubChem
37986614	The O-GlcNAc dichotomy: when does adaptation become pathological?	Costa TJ	2023 Nov 21	PubChem
37988652	Imidazolone as an Amide Bioisostere in the Development of β-1,3-N-Acetylglucosaminyltransferase 2 (B3GNT2) Inhibitors	Jackson JJ	2023 Nov 21	PubChem

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

KEGG BRITE Database

GlycoEpitope

Sequence Descriptors

International Collaboration

Acknowledgements