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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- The Human Metabolome Database
- CarbBank
-
- 9
- 3780
- 3968
- 4708
- 25653
- 28493
- 29021
- 29527
- 29549
- 31775
- 32028
- 32903
- 33539
- 36048
- 36270
- 37035
- 37525
- 37675
- 37677
- 37678
- 39452
- 39454
- 39456
- 39609
- 39611
- 39613
- 39614
- 40149
- 40150
- 40151
- 40355
- 40591
- 40600
- 42059
- 42207
- 42220
- 43184
- 43893
- 43925
- 43926
- 43931
- 43932
- 43941
- 44395
- 44396
- 44397
- 44549
- 46453
- 47268
- 47468
- 47537
- 47603
- 47796
- 48630
- 48812
- 48813
- 49006
- 49732
- 50589
- 50736
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Sus scrofa (pig) | |
| unidentified influenza virus | |
| Saccharomyces cerevisiae (brewer's yeast) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| A0A8I6A122 | TATA box-binding protein-like 1 | ||
| A0A8I6AMY7 | EMSY transcriptional repressor, BRCA2 interacting | ||
| A0AV96 | RNA-binding protein 47 | ||
| A0AVK6 | Transcription factor E2F8 | ||
| A0AVT1 | Ubiquitin-like modifier-activating enzyme 6 | ||
| A0FGR8 | Extended synaptotagmin-2 | ||
| A0MZ66 | Shootin-1 | ||
| A0PJY2 | Fez family zinc finger protein 1 | ||
| A1A6K6 | Nuclear speckle RNA-binding protein A | ||
| A1L0T0 | 2-hydroxyacyl-CoA lyase 2 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Sus scrofa |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Mus musculus |
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Homo sapiens |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 35230102 | Thermal Proteome Profiling Reveals the O-GlcNAc-Dependent Meltome | King DT | 2022 Mar 01 |
|
| 35232398 | Structural insights into the non-inhibitory mechanism of the anti-EGFR EgB4 nanobody | Zeronian MR | 2022 Mar 01 |
|
| 34958847 | Structure of recombinantly expressed cockroach Lili-Mip protein in glycosylated and deglycosylated forms | KanagaVijayan D | 2022 Mar |
|
| 35120929 | Comparison of glycoside hydrolase family 3 β-xylosidases from basidiomycetes and ascomycetes reveals evolutionarily distinct xylan degradation systems | Kojima K | 2022 Mar |
|
| 35183508 | Nutrient-responsive O-GlcNAcylation dynamically modulates the secretion of glycan-binding protein galectin 3 | Mathew MP | 2022 Mar |
|
| 35427837 | The beneficial effect of global O-GlcNAcylation on odontogenic differentiation of human dental pulp cells via mTORC1 pathway | Hu Y | 2022 Jun |
|
| 35289036 | Endo-M Mediated Chemoenzymatic Approach Enables Reversible Glycopeptide Labeling for O-GlcNAcylation Analysis | Chen Y | 2022 Jun 7 |
|
| 35665438 | N -Acetylglucosamine Promotes Tomato Plant Growth by Shaping the Community Structure and Metabolism of the Rhizosphere Microbiome | Sun J | 2022 Jun 29 |
|
| 35768499 | A broadly neutralizing antibody against SARS-CoV-2 Omicron variant infection exhibiting a novel trimer dimer conformation in spike protein binding | Wang Y | 2022 Jun 29 |
|
| 35732171 | Cryo-EM structures of SARS-CoV-2 Omicron BA.2 spike | Stalls V | 2022 Jun 28 |
|
