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GlyTouCan
Glycan Structure Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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GALAXY
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G52428MJ
Summary
- GlyTouCan ID
-
G52428MJ
- IUPAC Condensed
- Gal(b1-4)GlcNAc(b1-2)[Gal(b1-4)GlcNAc(b1-4)]Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- N-Glycan core basic N-acetyllactosamine Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1786.65
3D Structures
Organisms
| Organisms | Evidence |
|---|---|
| Homo sapiens (human) |
Taxonomic Hierarchy
GALAXY
Glucose Units
- ODS
- 13.9
- Amide
- 7.5
- Degrading Enzymes
G43664YB
G02830HS
G26182BM
G36108GD
G61088TM
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P01215 | Glycoprotein hormones alpha chain | ||
| P07602 | Prosaposin | ||
| P0DN86 | Choriogonadotropin subunit beta 3 |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:a-dman-HEX-1:5 14b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:5o(6+1)13d 13:1o(6+1)14d
- WURCS
- WURCS=2.0/5,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-1-4-3-5/a4-b1_a6-j1_b4-c1_c3-d1_c6-i1_d2-e1_d4-g1_e4-f1_g4-h1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 15316280 | Abnormal biantennary sugar chains are expressed in human chorionic gonadotropin produced in the choriocarcinoma cell line, JEG-3 | Takamatsu S | 2004 |
|
| 11180632 | Structure of the asparagine-linked sugar chains of porcine kidney and human urine cerebroside sulfate activator protein | Faull KF | 2000 Dec |
|
| 8344278 | Structural study of the oligosaccharide moieties of sphingolipid activator proteins, saposins A, C and D obtained from the spleen of a Gaucher patient | ITO K | 1993 Jul 01 |
|
| 1967025 | Altered glycosylation of human chorionic gonadotropin decreases its hormonal activity as determined by cyclic-adenosine 3',5'-monophosphate production in MA-10 cells | Amano J | 1990 Sep |
|
| 2110822 | Characteristics of asparagine-linked sugar chains of sphingolipid activator protein 1 purified from normal human liver and GM1 gangliosidosis (type 1) liver | Yamashita K | 1990 Mar 01 |
|
| 6643471 | Structures of the asparagine-linked sugar chains of human chorionic gonadotropin produced in choriocarcinoma. Appearance of triantennary sugar chains and unique biantennary sugar chains | Mizuochi T | 1983 Dec 10 |
|
