Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
Histone deacetylase 1
Summary
- UniProt ID
- Q13547
- Gene Symbol
- HDAC1 RPD3L1
- Gene ID
- 3065
- Organism
- Homo sapiens (human)
Annotation
- Keyword
- 3D-structure Acetylation Biological rhythms Chromatin regulator Hydrolase Isopeptide bond Metal-binding Methylation Nucleus Phosphoprotein Proteomics identification Reference proteome Repressor S-nitrosylation Transcription regulation Ubl conjugation Zinc
Gene Ontology (GO)
| GO Term | Evidence Code | Reference |
|---|---|---|
| negative regulation of transcription by RNA polymerase II | ||
| negative regulation of transcription by RNA polymerase II | ||
| negative regulation of transcription by RNA polymerase II | ||
| negative regulation of transcription by RNA polymerase II | ||
| chromatin organization |
GO Hierarchy
biological process
biological regulation [inference]
regulation of biological process [inference]
regulation of signaling [inference]
positive regulation of biological process [inference]
negative regulation of biological process [inference]
regulation of response to stimulus [inference]
regulation of developmental process [inference]
regulation of cellular process [inference]
regulation of cell communication [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
negative regulation of metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of primary metabolic process [inference]
regulation of cell differentiation [inference]
positive regulation of cellular process [inference]
negative regulation of cellular process [inference]
| GO Term | Evidence Code | Reference |
|---|---|---|
| histone deacetylase complex | ||
| histone deacetylase complex | ||
| histone deacetylase complex | ||
| histone deacetylase complex | ||
| chromatin |
GO Hierarchy
| GO Term | Evidence Code | Reference |
|---|---|---|
| RNA polymerase II cis-regulatory region sequence-specific DNA binding | ||
| RNA polymerase II core promoter sequence-specific DNA binding | ||
| core promoter sequence-specific DNA binding | ||
| transcription corepressor binding | ||
| p53 binding |
GO Hierarchy
Sequence
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVKLA
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 114 |
|
|||
| 145 |
|
|||
| 263 |
|
|||
| 406 |
|
G49108TO
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| Activation of rRNA Expression by ERCC6 (CSB) and EHMT2 (G9a) | Homo sapiens |
| Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants | Homo sapiens |
| Constitutive Signaling by NOTCH1 PEST Domain Mutants | Homo sapiens |
| Deactivation of the beta-catenin transactivating complex | Homo sapiens |
| Differentiation of naive CD4+ T cells to T helper 2 cells (Th2 cells) | Homo sapiens |
| Downregulation of SMAD2/3:SMAD4 transcriptional activity | Homo sapiens |
| Estrogen-dependent gene expression | Homo sapiens |
| FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes | Homo sapiens |
| Factors involved in megakaryocyte development and platelet production | Homo sapiens |
| Formation of the beta-catenin:TCF transactivating complex | Homo sapiens |
Human Protein Atlas
Tissue with high expression from Human Protein Atlas. Tissues that are highly expressed are highlighted.
