Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 326 - 350 of 1840 in total
Species ▼ Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID
Rotavirus VP8 (spike protein) Sialic acid(2-O-methyl-α-Neu5Gc (Neu5Gc2Me)) Monosaccharides Binding 17306299
Rotavirus Unknown Lactosylceramide (t18:0-h16:0-h24:0) Diosylceramides Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown Asialo-GM2 (Gangliotriosylceramide; GgO3) Oligoglycosylceramides GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 12628483
Rotavirus Unknown Asialo-GM2 (Gangliotriosylceramide; GgO3) Oligoglycosylceramides GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown nLc4Cer (Neolactotetraosylceramide; Paragloboside) Oligoglycosylceramides Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown GM3(NeuGc) Monosialoglycosphingolipids NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11160731
Rotavirus Unknown GM2(NeuGc) Monosialoglycosphingolipids GalNAc(b1-4)[NeuGc(a2-3)]Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown GM3(NeuAc) Monosialoglycosphingolipids NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11160731
Rotavirus Unknown NeuAc-SLex (GSL) (Sialylneolactofucopentaosylcer) Monosialoglycosphingolipids NeuAc(a2-3)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown Sialyl-6-Paragloboside (S-6-PG; α2,6-sialylparagloboside) Monosialoglycosphingolipids NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown Sialyl Lewis a (SLea) (GSL) Monosialoglycosphingolipids NeuAc(a2-3)Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown I-active Sialyl lactoisooctaosylceramide Sialoglycosphingolipids Gal(a1-3)Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown NeuGc3-nLc6Cer Sialoglycosphingolipids NeuGc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Binding 11160731
Rotavirus Unknown Sialic acid Monosaccharides MA-104 cells Binding 10659372
Rotavirus VP8 Sialic acid Monosaccharides Epithelial cells of small intestine Binding 16511112
Rotavirus Virus Spike Protein VP4 (mapped between aminoacids 93 and 208 of its trypsin cleavage fragment VP8) Sialic acid-containing cell compounds Glycoconjugates Binding 9261399
Rotavirus VP8 (galectin) Sialic acid(2-O-methyl-α-Neu5Ac (Neu5Ac2Me)) Monosaccharides Binding 17306299
Rotavirus VP8 (spike protein) Sialic acid Monosaccharides Binding 17277447
Rotavirus VP8 Sialic acid Monosaccharides Binding 18540062
Rotavirus TLP (Triple-layered virus particles) Gangliosides Sialoglycosphingolipids Binding 10659372
Rotavirus Unknown Lactosylceramide (d18:1-16:0/24:1) Diosylceramides Gal(b1-4)Glc(b1-1)Cer Not Binding 11160731
Rotavirus Unknown Galactosylceramide (Galactocerebroside) Monoglycosylceramides Gal(b1-1)Cer Not Binding 11160731
Rotavirus Unknown Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) Oligoglycosylceramides Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 12628483
Rotavirus Unknown Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 11160731
Rotavirus Unknown Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) Oligoglycosylceramides Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 11160731

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