Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 351 - 375 of 1840 in total
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding ▼ PubMed ID
Helicobacter pylori 35S-labeled or 125I-labeled proteins isoGb4 (Isoglobotetraosylceramide; iGb4) Oligoglycosylceramides Rat colon carcinoma GalNAc(b1-3)Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 9499377
Helicobacter pylori 35S-labeled or 125I-labeled proteins GgO3 (de-N- acylated) Oligoglycosylceramides Guinea pig erythrocytes GalNH2(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 9499377
Helicobacter pylori 35S-labeled or 125I-labeled proteins Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Human erythrocytes, Rabbit intestine Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 9499377
Escherichia coli F1C Gb5 (Forssman glycolipid) Oligoglycosylceramides Dog intestine GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C isoGb4 (Isoglobotetraosylceramide; iGb4) Oligoglycosylceramides Rat intestine GalNAc(b1-3)Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C H5 type 1 pentaglycosylceramide (lacto-series) Oligoglycosylceramides Human small intestine Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C Alpha-Galactosyl paragloboside Oligoglycosylceramides Rabbit erythrocytes Gal(a1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) (d18:1-16:0/24:0) Oligoglycosylceramides Human erythrocytes Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C Lewis x (Lex) (GSL) Oligoglycosylceramides Dog intestine Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Escherichia coli F1C Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) Oligoglycosylceramides Mouse feces Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Neisseria gonorrhoeae Lectin-like proteins (adhesin) isoGb4 (Isoglobotetraosylceramide; iGb4) Oligoglycosylceramides Gonorrhoeae patients GalNAc(b1-3)Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) H5 type 1 pentaglycosylceramide (lacto-series) Oligoglycosylceramides Gonorrhoeae patients Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) Lc4Cer (Lactotetraosylceramide) Oligoglycosylceramides Gonorrhoeae patients Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) Lewis x (Lex) (GSL) Oligoglycosylceramides Gonorrhoeae patients Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Gonorrhoeae patients Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Propionibacterium granulosum Lectin-like proteins (adhesin) isoGb4 (Isoglobotetraosylceramide; iGb4) Oligoglycosylceramides Human skin GalNAc(b1-3)Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Propionibacterium granulosum Lectin-like proteins (adhesin) H5 type 1 pentaglycosylceramide (lacto-series) Oligoglycosylceramides Human skin Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Propionibacterium granulosum Lectin-like proteins (adhesin) Lewis x (Lex) (GSL) Oligoglycosylceramides Human skin Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Actinomyces viscosus Unknown Gb5 (Forssman glycolipid) Oligoglycosylceramides Dog small intestine GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown isoGb4 (Isoglobotetraosylceramide; iGb4) Oligoglycosylceramides Rat colon carcinoma GalNAc(b1-3)Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown unnamed ligand Oligoglycosylceramides Human meconium GalNAc(a1-3)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown unnamed ligand Oligoglycosylceramides Human meconium GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown A6 type 2 glycosphingolipid (A6-2) Oligoglycosylceramides Dog small intestine GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown unnamed ligand Oligoglycosylceramides Dog small intestine Fuc(a1-2)Gal(b1-4)GlcNAc(b1-3)Gal(b1-3)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown unnamed ligand Oligoglycosylceramides Rat small intestine [Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461

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