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Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
|---|---|---|---|---|---|---|---|
| Pseudomonas aeruginosa | PA-IL | Methyl-β-Gal | Monosaccharides | Binding | 10967261 | ||
| Pseudomonas aeruginosa | PA-IL | Methyl-α-Gal | Monosaccharides | Binding | 10967261 | ||
| Helicobacter pylori | Unknown | Phosphatidylethanolamine (PE) | Non-glycosylated Lipids | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Phospholipids | Non-glycosylated Lipids | Binding | 16088272 | ||
| Escherichia coli | (class I/II/III) | Globo-A | Oligoglycosylceramides | Binding | 7721812 | ||
| Escherichia coli | P-fimbriae | Globo-A | Oligoglycosylceramides | Binding | 7721812 | ||
| Pseudomonas aeruginosa | PA-IIL | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 16762477 | ||
| Helicobacter pylori | Leb-binding adhesin | Fucosylated Lewis b (Leb) histoblood group antigens | Oligosaccharides | Binding | 10341176 | ||
| Norovirus | Unknown | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 18701592 | ||
| Helicobacter pylori | Unknown | Blood group antigens | Oligosaccharides | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 16088272 | ||
| Helicobacter pylori | BabA (blood group antigen binding adhesin) | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 15273394 | ||
| Helicobacter pylori | BabA (blood group antigen binding adhesin) | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 15973004 | ||
| Helicobacter pylori | Adhesins | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 8018146 | ||
| Helicobacter pylori | Lectin-hemagglutinin adhesins | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 12704182 | ||
| Lactobacillus johnsonii | Unknown | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 11087711 | ||
| Plasmodium falciparum | Unknown | Polylactosamine of band 3 | Polysaccharides | Binding | 8574698 | ||
| Escherichia coli | PrsG (class III) | DSGG (Disialosyl galactosyl globoside, disialyl Gb5) | Disialoglycosphingolipids | Human kidney tissues | NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 9673272 |
| Escherichia coli | PapG (class I) | DSGG (Disialosyl galactosyl globoside, disialyl Gb5) | Disialoglycosphingolipids | Human kidney tissues | NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 9673272 |
| Escherichia coli | P-fimbriae | DSGG (Disialosyl galactosyl globoside, disialyl Gb5) | Disialoglycosphingolipids | Human kidney tissues | NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 9673272 |
| Escherichia coli | PapG (class II) | DSGG (Disialosyl galactosyl globoside, disialyl Gb5) | Disialoglycosphingolipids | Human kidney tissues | NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 9673272 |
| Mycoplasma pneumoniae | Unknown | Seminolipid (Sulfogalactosylglycerolipid) | Glycolipids | Human colon adenocarcinoma cells (WiDr ) | Gal(3SO4)(b1-3)-alkylacylglycerol | Binding | 2470753 |
| Escherichia coli | S-fimbriae | NeuAcα3Galβ-containing glycoproteins | Glycoproteins | Lumenal surfaces of the vascular endothelium in the neonatal rat brain | NeuAc(a2-3)Gal(b | Binding | 15973004 |
| Norovirus | Unknown | Sialyl-dimeric Lewis x (SdiLex-HSA) | Glycoproteins | Human serum albumin | NeuAc(a2-3)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(c)-APD | Binding | 19054801 |
| Escherichia coli | SfaS | NeuAcα3Galβ-containing glycoproteins | Glycoproteins | Lumenal surfaces of the vascular endothelium in the neonatal rat brain | NeuAc(a2-3)Gal(b | Binding | 15973004 |
