Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 776 - 800 of 1840 in total
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source ▲ Glycan Sequence Binding PubMed ID
Hantaan virus DBA (Dolichos biflorus agglutinin) N-Acetylgalactosamine Monosaccharides Vero E6/P388D1 cells GalNAc Binding 10542025
Borrelia burgdorferi Unknown Chondroitin 6-sulfate (C-6S) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-A) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-A) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-A) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-A) Glycosaminoglycans Vero cells Not Binding 9826395
Escherichia coli Shiga toxin (Stx2) Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Vero cells Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 15292153
Escherichia coli Unknown Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Vero cells Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 15292153
Actinomyces naeslundii Unknown SSEA-3 (GSL) (Galactosyl globoside; Gb5) Oligoglycosylceramides Vero cells Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 2358461
Borrelia burgdorferi Unknown Heparin (N-desulfated, N-acetylated) Glycosaminoglycans Vero cells Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-D) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Dermatan sulfate Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-D) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-D) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Chondroitin 4-sulfate (C-4S) Glycosaminoglycans Vero cells Not Binding 9826395
Borrelia burgdorferi Unknown Heparan sulfate (fraction: HS-D) Glycosaminoglycans Vero cells Not Binding 9826395
Actinomyces viscosus Unknown SSEA-3 (GSL) (Galactosyl globoside; Gb5) Oligoglycosylceramides Vero cells Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Borrelia burgdorferi Unknown Heparin (completely desulfated, N-acetylated) Glycosaminoglycans Vero cells Not Binding 9826395
Propionibacterium granulosum Unknown isoGb3 (Isoglobotriaosylceramide; iGb3) Oligoglycosylceramides Whole dog small intestine Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Binding 2452754
Propionibacterium granulosum Unknown Lactosylceramide (Lactocerebroside) Diosylceramides Whole dog small intestine Gal(b1-4)Glc(b1-1)Cer Binding 2452754
Bordetella pertussis FHA (442-863) Heparin Glycosaminoglycans WiDr cells, HeLa cells, Vero cells, Extracellular matrix (ECM) Binding 11348687
Bordetella pertussis FHA (442-863) Dextran sulfate Polysaccharides WiDr cells, HeLa cells, Vero cells, Extracellular matrix (ECM) Binding 11348687
Entamoeba histolytica Gal/GalNAc Lectins (260-kDa) N-Acetylgalactosamine Monosaccharides c-Met on hepatocytes GalNAc Binding 9878032
Entamoeba histolytica Gal/GalNAc Lectins (260-kDa) Galactose Monosaccharides c-Met on hepatocytes Gal Binding 9878032
Streptococcus gordonii SspA/SspB (AgI/II family) Collagen (type I) Glycoproteins humHn oral cavity (root dentine) Binding 16177339

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024