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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▼ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
| Escherichia coli | F1C | Glucosylceramide (t18:0-h18:0) | Monoglycosylceramides | Rat intestine | Glc(b1-1)Cer | Binding | 11877427 |
| Escherichia coli | F1C | Glucosylceramide (d18:1/t18:0-16:0-24:0) | Monoglycosylceramides | Porcine kidney | Glc(b1-1)Cer | Not Binding | 11877427 |
| Bordetella pertussis | PT (subunits S2/S3 of B oligomer) | Glucosylceramide | Monoglycosylceramides | Human cilia of the respiratory epithelium | Glc(b1-1)Cer | Binding | 1729677 |
| Bordetella pertussis | Pertussis toxin | Glucosylceramide | Monoglycosylceramides | Human cilia of the respiratory epithelium | Glc(b1-1)Cer | Binding | 1729677 |
| Mycoplasma pneumoniae | Unknown | Glucosylceramide | Monoglycosylceramides | Human colon adenocarcinoma cells (WiDr ) | Glc(b1-1)Cer | Binding | 2470753 |
| Lactobacillus casei | Unknown | Glucosylceramide | Monoglycosylceramides | Intestinal tract | Glc(b1-1)Cer | Binding | 8912650 |
| Escherichia coli | F1C | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Binding | 10816509 | |
| Actinobacillus pleuropneumoniae | LPS | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Binding | 10496867 | |
| Escherichia coli | PrsG (class III) | Glucosylceramide | Monoglycosylceramides | Colonic adenocarcinoma | Glc(b1-1)Cer | Not Binding | 9673272 |
| Escherichia coli | PapG (class I) | Glucosylceramide | Monoglycosylceramides | Colonic adenocarcinoma | Glc(b1-1)Cer | Not Binding | 9673272 |
| Escherichia coli | P-fimbriae | Glucosylceramide | Monoglycosylceramides | Colonic adenocarcinoma | Glc(b1-1)Cer | Not Binding | 9673272 |
| Helicobacter pylori | 35S-labeled or 125I-labeled proteins | Glucosylceramide | Monoglycosylceramides | Various sources | Glc(b1-1)Cer | Not Binding | 9499377 |
| Escherichia coli | PapG (class II) | Glucosylceramide | Monoglycosylceramides | Colonic adenocarcinoma | Glc(b1-1)Cer | Not Binding | 9673272 |
| Neisseria gonorrhoeae | Lectin-like proteins (adhesin) | Glucosylceramide | Monoglycosylceramides | Gonorrhoeae patients | Glc(b1-1)Cer | Not Binding | 2468365 |
| Actinomyces viscosus | Unknown | Glucosylceramide | Monoglycosylceramides | Most tissues | Glc(b1-1)Cer | Not Binding | 2358461 |
| Actinomyces naeslundii | Unknown | Glucosylceramide | Monoglycosylceramides | Most tissues | Glc(b1-1)Cer | Not Binding | 2358461 |
| Escherichia coli | PsaA/B (pH-6 antigen) | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 9712817 | |
| Rotavirus | Unknown | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 11160731 | |
| Yersinia pestis | PsaA/B (pH-6 antigen) | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 9712817 | |
| Propionibacterium granulosum | Lectin-like proteins (adhesin) | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 2468365 | |
| Cytomegalovirus | Unknown | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 9780061 | |
| Propionibacterium freudenreichii | Unknown | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 2435422 | |
| Propionibacterium granulosum | Unknown | Glucosylceramide | Monoglycosylceramides | Glc(b1-1)Cer | Not Binding | 2435422 | |
| Vibrio cholerae | MSHA (mannose/glucose-specific hemagglutinin) | Glucose | Monosaccharides | Patient with acute watery diarrhea | Glc | Binding | 10219594 |
| Treponema pallidum | Tp38 (TpMglB-2) lipoproteins | Glucose | Monosaccharides | Glc | Binding | 15060032 |
