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Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species ▼ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
| Helicobacter pylori | Unknown | Mucin | Glycoproteins | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Glycosphingolipids | Glycosphingolipids | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Mono-N-propionylated S-3-PG (paragloboside) | Glycosphingolipids | Binding | 15659615 | ||
| Helicobacter pylori | Unknown | Mono-de-N-acetylated S-3-PG (paragloboside) | Glycosphingolipids | Binding | 15659615 | ||
| Helicobacter pylori | Unknown | Phosphatidylethanolamine (PE) | Non-glycosylated Lipids | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Phospholipids | Non-glycosylated Lipids | Binding | 16088272 | ||
| Helicobacter pylori | Leb-binding adhesin | Fucosylated Lewis b (Leb) histoblood group antigens | Oligosaccharides | Binding | 10341176 | ||
| Helicobacter pylori | Unknown | Blood group antigens | Oligosaccharides | Binding | 16088272 | ||
| Helicobacter pylori | Unknown | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 16088272 | ||
| Helicobacter pylori | BabA (blood group antigen binding adhesin) | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 15273394 | ||
| Helicobacter pylori | BabA (blood group antigen binding adhesin) | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 15973004 | ||
| Helicobacter pylori | Adhesins | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 8018146 | ||
| Helicobacter pylori | Lectin-hemagglutinin adhesins | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 12704182 | ||
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | GD1a | Disialoglycosphingolipids | Human brain | NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer | Not Binding | 9228091 |
| Helicobacter pylori | 35S-labeled or 125I-labeled proteins | GM3(NeuAc) | Monosialoglycosphingolipids | Human brain | NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 9499377 |
| Helicobacter pylori | 35S-labeled or 125I-labeled proteins | GM3(NeuGc) | Monosialoglycosphingolipids | Piglet intestine | NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 9499377 |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | GM3(NeuAc) | Monosialoglycosphingolipids | Human granulocytes | NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 9228091 |
| Helicobacter pylori | SabA (sialic acid-binding adhesin) | Sialyl Lewis x (SLex) antigen | Oligosaccharides | Gastric epithelial progenitors (GEPs) | NeuAc(a2-3)Gal(b1-4) | Binding | 16406776 |
| Helicobacter pylori | HpaA | Sialyl Lewis x (SLex) antigen | Oligosaccharides | Gastric epithelial progenitors (GEPs) | NeuAc(a2-3)Gal(b1-4) | Binding | 16406776 |
| Helicobacter pylori | HP0721 | Sialyl Lewis x (SLex) antigen | Oligosaccharides | Gastric epithelial progenitors (GEPs) | NeuAc(a2-3)Gal(b1-4) | Binding | 16406776 |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | NeuGc3-nLc6Cer | Sialoglycosphingolipids | Rabbit thymus | NeuGc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer | Binding | 9228091 |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | NeuAc3-nLc6Cer (Sialyl neolactohexaosylceramide) | Sialoglycosphingolipids | Human erythrocytes, Human placenta | NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer | Binding | 9228091 |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | unnamed ligand | Sialoglycosphingolipids | Human erythrocytes | NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer | Binding | 9228091 |
| Helicobacter pylori | 35S-labeled or 125I-labeled proteins | Sulfatide (CSE) | Sulfoglycosphingolipids | Piglet intestine | HSO3(-3)Gal(b1-1)Cer | Not Binding | 9499377 |
| Helicobacter pylori | Neutrophil-activating proteins (150-kDa) | Sulfo-gangliotetraosylceramide (Sulfo-GgO4) | Sulfoglycosphingolipids | Mouse intestine | HSO3(-3)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 9228091 |
