Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 76 - 100 of 1840 in total
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding ▼ PubMed ID
Escherichia coli F1C Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides Human erythrocytes GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 11877427
Neisseria gonorrhoeae Lectin-like proteins (adhesin) Fucosyl Asialo GM1 Oligoglycosylceramides Gonorrhoeae patients Fuc(a1-2)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) H5 type 2 pentaglycosylceramide (neolacto-series) Oligoglycosylceramides Gonorrhoeae patients Fuc(a1-2)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Neisseria gonorrhoeae Lectin-like proteins (adhesin) nLc4Cer (Neolactotetraosylceramide; Paragloboside) Oligoglycosylceramides Gonorrhoeae patients Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Propionibacterium granulosum Lectin-like proteins (adhesin) H5 type 2 pentaglycosylceramide (neolacto-series) Oligoglycosylceramides Human skin Fuc(a1-2)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2468365
Actinomyces viscosus Unknown Fucosyl Asialo GM1 Oligoglycosylceramides Mouse large intestine Fuc(a1-2)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces viscosus Unknown unnamed ligand Oligoglycosylceramides Human kidney GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Mycoplasma pneumoniae Unknown Asialo-GM2 (Gangliotriosylceramide; GgO3) Oligoglycosylceramides Human colon adenocarcinoma cells (WiDr ) GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2470753
Mycoplasma pneumoniae Unknown I-active Lactoisooctaosylceramide Oligoglycosylceramides Human colon adenocarcinoma cells (WiDr ) Gal(b1-4)GlcNAc(b1-6)[Gal(b1-4)GlcNAc(b1-3)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 2470753
Lactobacillus johnsonii Unknown H5 type 2 pentaglycosylceramide (neolacto-series) Oligoglycosylceramides Human erythrocytes Fuc(a1-2)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 11087711
Helicobacter pylori Neutrophil-activating proteins (150-kDa) nLc6 (Neolactohexaosylceramide) Oligoglycosylceramides Rabbit thymus, Human erythrocytes Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 9228091
Helicobacter pylori Neutrophil-activating proteins (150-kDa) Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides Human erythrocytes GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 9228091
Shigella dysenteriae B subunit isoGb3 (Isoglobotriaosylceramide; iGb3) Oligoglycosylceramides Dog small intestine Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 3543013
Shigella dysenteriae B subunit unnamed ligand Oligoglycosylceramides Human kidney GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 3543013
Shigella dysenteriae B subunit Asialo-GM2 (Gangliotriosylceramide; GgO3) Oligoglycosylceramides Mouse small intestine GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 3543013
Lactobacillus casei Unknown Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides Intestinal tract GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 8912650
Actinomyces naeslundii Unknown Fucosyl Asialo GM1 Oligoglycosylceramides Mouse large intestine Fuc(a1-2)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces naeslundii Unknown unnamed ligand Oligoglycosylceramides Human kidney GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Actinomyces naeslundii Type 2-fimbriae β-linked galactosamine Saccharides Plaque GalNAc(b 2:2 Not Binding 9712794
Actinomyces naeslundii Type 2-fimbriae β-linked galactosamine Saccharides Buccae GalNAc(b 2:2 Not Binding 9712794
Rotavirus Unknown Lactosylceramide (d18:1-16:0/24:1) Diosylceramides Gal(b1-4)Glc(b1-1)Cer Not Binding 11160731
Norovirus Unknown Blood group B antigen (B-tri-HSA) Glycoproteins Gal(a1-3)[Fuc(a1-2)]Gal(b)-O-APE Not Binding 18701592
Rotavirus Unknown Galactosylceramide (Galactocerebroside) Monoglycosylceramides Gal(b1-1)Cer Not Binding 11160731
Yersinia pestis PsaA/B (pH-6 antigen) Galactosylceramide (nonhydroxylated fatty acids) Monoglycosylceramides Gal(b1-1)Cer Not Binding 9712817
Propionibacterium granulosum Lectin-like proteins (adhesin) Galactosylceramide (Galactocerebroside) Monoglycosylceramides Gal(b1-1)Cer Not Binding 2468365

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