Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 1551 - 1575 of 1840 in total
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence ▼ Binding PubMed ID
Streptococcus gordonii SspB (Antigen I/II) Salivary glycoprotein Glycoproteins Tooth surface Binding 10341176
Streptococcus sobrinus SpaP (Antigen I/II Family) Salivary glycoprotein Glycoproteins Saliva Binding 12640357
Streptococcus parasanguinis FimA (Lral family); localized to the tip of peritrichous surface fimbria Salivary glycoprotein Glycoproteins Tooth surface Binding 10341176
Influenza virus Unknown Salivary glycoprotein Glycoproteins Human saliva Binding 1740131
Bordetella pertussis Iron-induced surface-exposed proteins Mucin Glycoproteins Respiratory epithelial cells (A549) Binding 17727651
Campylobacter upsaliensis Unknown Mucin Glycoproteins Human small intestine Binding 8926069
Streptococcus mutans Unknown Salivary glycoprotein (gp340) Glycoproteins Dental plaque (caries-associated) Binding 11007786
Listeria innocua Unknown Mannose 6-phosphate insulin-like growth factor-II receptor (M6P/IGF-IIR) Glycoproteins Fetal calf serum Binding 16369013
Rhinovirus Unknown ICAM-1 (intercellular adhesion molecule-1) domain1/2 Glycoproteins Primary chicken embryo fibroblasts (CEFs) Binding 1356290
Listeria monocytogenes Unknown Mannose 6-phosphate insulin-like growth factor-II receptor (M6P/IGF-IIR) Glycoproteins Fetal calf serum Binding 16369013
Neisseria meningitidis PorA C4b-binding protein (C4bp) Glycoproteins Serum Binding 15879129
Pseudomonas aeruginosa Flagellin MUC1 mucin Glycoproteins Epithelial cells Binding 11880301
Bordetella pertussis Unknown Fetuin Glycoproteins Bovine Binding 14532091
Bordetella pertussis Fim2 (H1/H2) Heparin Glycosaminoglycans ECM Binding 11348687
Foot-and-mouth disease virus VP1 (RGD peptide) Heparin Glycosaminoglycans Extracellular matrix (ECM) Binding 9557639
Bordetella pertussis FHA (442-863) Heparin Glycosaminoglycans WiDr cells, HeLa cells, Vero cells, Extracellular matrix (ECM) Binding 11348687
Bordetella pertussis FHA (442-863) Heparin Glycosaminoglycans Respiratory epithelial cells Binding 17106803
Foot-and-mouth disease virus Natural ligand of integrin [alpha]v[beta]3 Heparin Glycosaminoglycans Extracellular matrix (ECM) Binding 8764038
Herpes simplex virus Unknown Heparin Glycosaminoglycans Human cervical cells Binding 9420059
Borrelia burgdorferi BBK32 Heparin Glycosaminoglycans Mammalian cell surface Binding 16368999
Shigella dysenteriae Stx Platelet-specific GSL (Stx band 0.03) Glycosphingolipids Human platelets Binding 9712788
Cryptococcus neoformans Adhesins Sucrose Monosaccharides Human lung epithelial cell line (A549) Binding 9453390
Cryptococcus neoformans Adhesins Inositol Non-glycosylated Lipids Human lung epithelial cell line (A549) Binding 9453390
Clostridium botulinum Botulinum neurotoxin (type D) Phosphatidylethanolamine (PE) Non-glycosylated Lipids Presynaptic neuronal cells Binding 18242046
Pseudomonas aeruginosa exoenzyme S Phosphatidylethanolamine (PE) Non-glycosylated Lipids Epithelial cells Binding 9224879

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024